Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL512326.1-201ENST00000443050 721 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 FGF7P6-202ENST00000451282 293 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 RPS20P32-201ENST00000456044 356 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 RPS20P24-201ENST00000457473 361 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AC004924.1-201ENST00000480160 781 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 RN7SL812P-201ENST00000493791 279 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 NDUFB4P2-201ENST00000509515 391 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 TXNP6-201ENST00000510190 310 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 PPBPP1-201ENST00000510807 373 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 NPM1P41-201ENST00000512920 831 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AC022878.1-201ENST00000530684 149 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 OR4P1P-201ENST00000530808 1136 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AC091135.1-201ENST00000585943 307 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 RNU4-89P-201ENST00000607443 133 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AC006329.2-201ENST00000611491 394 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AC099669.2-201ENST00000616549 437 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AL157786.1-207ENST00000627771 695 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 MTND5P26-201ENST00000426018 1752 ntBASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SLC44A4Q53GD3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.46□□□□□ -1.69
SLC44A4Q53GD3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SLC44A4Q53GD3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 RNA5SP130-201ENST00000364431 114 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 RNA5SP151-201ENST00000365632 117 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 RNU6-761P-201ENST00000384148 107 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 RPS3AP24-201ENST00000407896 734 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AC245052.5-201ENST00000416320 649 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 COX6B1P7-201ENST00000430845 235 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AC007389.2-201ENST00000434630 306 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 SKP1P1-201ENST00000438081 489 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AC114495.1-201ENST00000441274 436 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AC003071.1-201ENST00000451219 789 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AL033528.1-201ENST00000453780 140 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 ACTR3P3-201ENST00000480448 893 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AL358832.1-201ENST00000497800 389 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 RN7SKP298-201ENST00000515950 94 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 RNU6-314P-201ENST00000516574 104 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 RNU6-714P-201ENST00000516963 103 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 OR8L1P-201ENST00000534005 955 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AC007014.2-201ENST00000615581 479 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AL596245.1-201ENST00000618994 362 ntBASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A4Q53GD3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 RLIMP1-201ENST00000339626 1680 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC139769.1-204ENST00000472297 1931 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 Y_RNA.46-201ENST00000362695 102 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 RN7SKP226-201ENST00000364912 300 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 RNU4-78P-201ENST00000410940 126 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 RPS3AP3-201ENST00000411933 242 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 HMGB3P23-201ENST00000414981 585 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC108032.1-201ENST00000416706 207 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 CCDC58P2-201ENST00000417131 366 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 RPL7P28-201ENST00000437739 740 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 DNAJC19P4-201ENST00000440115 345 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms