Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 U3.20-201ENST00000390909 217 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AC016769.3-201ENST00000396562 315 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 BX842559.1-201ENST00000419615 532 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AC099677.3-201ENST00000427081 395 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 CYCSP12-201ENST00000437729 300 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 RPL21P89-201ENST00000444021 467 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 RNU7-187P-201ENST00000458985 68 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AC091179.1-201ENST00000461606 579 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 RPL9P9-202ENST00000466501 579 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 RN7SL222P-201ENST00000476452 299 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 RPL7AP6-201ENST00000477943 801 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 RPL21P6-201ENST00000479171 504 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 RPS4XP1-201ENST00000482189 787 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AC069499.1-201ENST00000489433 509 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 IGHVII-53-1-201ENST00000519538 255 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 U6.106-201ENST00000636360 105 ntBASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.14□□□□□ -1.43
CTC1Q2NKJ3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 BDP1P-201ENST00000582658 1990 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 Y_RNA.151-201ENST00000363566 112 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 RNU6-708P-201ENST00000384217 107 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 RNU6-658P-201ENST00000384606 106 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 MIR625-201ENST00000385047 85 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 MIR628-201ENST00000385229 95 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 MIR765-201ENST00000390226 114 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 SNORA16.2-201ENST00000390991 127 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 RN7SKP213-201ENST00000410746 298 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 RN7SKP17-201ENST00000411242 351 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 AL354868.1-201ENST00000417077 482 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 RPL7L1P9-201ENST00000431298 745 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 AC108059.3-201ENST00000456388 214 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 PDCD5P2-201ENST00000507570 312 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 AC144568.1-201ENST00000520139 137 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 AL049779.2-201ENST00000553847 315 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 AL049539.1-201ENST00000611964 459 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 AC243654.2-201ENST00000612843 443 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 CR392039.4-201ENST00000624968 501 ntBASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTC1Q2NKJ3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 RNA5SP319-201ENST00000362768 119 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 SNORD81.1-201ENST00000363064 77 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 SNORD1C-201ENST00000363315 78 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 U8.4-201ENST00000363626 134 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 RNU1-85P-201ENST00000364127 164 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 Y_RNA.273-201ENST00000364703 102 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 SNORA56-201ENST00000383966 129 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AL133384.1-201ENST00000412744 351 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 RPL23AP74-201ENST00000437246 471 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms