Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
GABPAQ06546 AL672296.1-201ENST00000427780 2158 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GABPAQ06546 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
GABPAQ06546 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
GABPAQ06546 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.53□□□□□ -1.84
GABPAQ06546 AC107982.1-201ENST00000507171 1300 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
GABPAQ06546 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
GABPAQ06546 SNORA51.6-201ENST00000384151 125 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AC016769.3-201ENST00000396562 315 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 MTND4LP20-201ENST00000402379 270 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 MTATP6P20-201ENST00000414147 562 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 LUZP4P1-201ENST00000415420 344 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AC006960.1-201ENST00000419980 153 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AC092648.1-201ENST00000425870 423 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.53□□□□□ -1.84
GABPAQ06546 USP9YP24-201ENST00000434374 697 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.53□□□□□ -1.84
GABPAQ06546 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.53□□□□□ -1.84
GABPAQ06546 AC025750.2-201ENST00000442609 450 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AL135938.1-201ENST00000443141 297 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 USP9YP17-201ENST00000444617 696 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.53□□□□□ -1.84
GABPAQ06546 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.53□□□□□ -1.84
GABPAQ06546 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.53□□□□□ -1.84
GABPAQ06546 AC005410.1-202ENST00000460347 485 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 RPS4XP22-201ENST00000480755 780 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.53□□□□□ -1.84
GABPAQ06546 MTCO1P30-201ENST00000515244 580 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 RNA5SP217-201ENST00000515959 91 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.53□□□□□ -1.84
GABPAQ06546 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.53□□□□□ -1.84
GABPAQ06546 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.53□□□□□ -1.84
GABPAQ06546 AL049838.1-201ENST00000563647 981 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
GABPAQ06546 AP001521.1-201ENST00000609150 300 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AC008083.4-201ENST00000615076 444 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AC073968.1-201ENST00000618594 637 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AC022509.4-201ENST00000621404 572 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 AC092184.1-201ENST00000625042 715 ntBASIC3.53□□□□□ -1.84
GABPAQ06546 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.53□□□□□ -1.84
GABPAQ06546 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
GABPAQ06546 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GABPAQ06546 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GABPAQ06546 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.53□□□□□ -1.84
GABPAQ06546 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GABPAQ06546 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.53□□□□□ -1.84
GABPAQ06546 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.53□□□□□ -1.84
GABPAQ06546 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.53□□□□□ -1.85
GABPAQ06546 ZNF37BP-203ENST00000452306 1352 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
GABPAQ06546 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.52□□□□□ -1.85
GABPAQ06546 NACA3P-201ENST00000359690 648 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 Y_RNA.25-201ENST00000362528 102 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 RNU4-68P-201ENST00000364314 141 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 SNORD82-201ENST00000365530 70 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 RNU6-413P-201ENST00000384115 107 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 AL121972.1-201ENST00000402023 252 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 RNA5SP107-201ENST00000411358 122 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 RPS7P13-201ENST00000413955 498 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.52□□□□□ -1.85
GABPAQ06546 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
GABPAQ06546 AC004022.1-201ENST00000447766 1066 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 ZNF886P-201ENST00000450781 723 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 AC092155.2-201ENST00000454675 477 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 CFTRP1-201ENST00000456646 183 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 AC092757.1-201ENST00000467293 467 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 PABPC1P3-201ENST00000469174 459 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 NCOR1P1-202ENST00000486162 291 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 AC093767.1-201ENST00000504523 156 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 RNU6-1225P-201ENST00000516336 65 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GABPAQ06546 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.52□□□□□ -1.85
GABPAQ06546 AC008127.2-201ENST00000549925 1075 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 AL389895.1-201ENST00000554127 252 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.52□□□□□ -1.85
GABPAQ06546 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.52□□□□□ -1.85
GABPAQ06546 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.52□□□□□ -1.85
GABPAQ06546 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.52□□□□□ -1.85
GABPAQ06546 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.52□□□□□ -1.85
GABPAQ06546 AC231759.1-201ENST00000616455 597 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.52□□□□□ -1.85
GABPAQ06546 AC073348.1-201ENST00000623002 331 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 SCARNA15.3-201ENST00000626315 122 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.52□□□□□ -1.85
GABPAQ06546 SCARNA4.1-201ENST00000628597 123 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 AC138649.5-201ENST00000637456 137 ntBASIC3.52□□□□□ -1.85
GABPAQ06546 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.52□□□□□ -1.85
GABPAQ06546 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
GABPAQ06546 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GABPAQ06546 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GABPAQ06546 AL353746.1-201ENST00000566293 6881 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GABPAQ06546 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GABPAQ06546 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GABPAQ06546 RNU5D-1-201ENST00000363299 116 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 RNU6-339P-201ENST00000384310 107 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 EIF5P1-201ENST00000400019 1231 ntBASIC3.51□□□□□ -1.85
GABPAQ06546 AL024474.1-201ENST00000404655 591 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms