Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC138649.5-201ENST00000637456 137 ntBASIC2.48□□□□□ -2.01
SCN7AQ01118 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN7AQ01118 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.48□□□□□ -2.01
SCN7AQ01118 AP001486.2-201ENST00000561652 5113 ntBASIC2.48□□□□□ -2.01
SCN7AQ01118 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN7AQ01118 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SCN7AQ01118 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN7AQ01118 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN7AQ01118 BTBD10P2-201ENST00000404779 676 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 OR4K11P-201ENST00000431829 904 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 AC091917.2-201ENST00000505002 744 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 AC010265.1-201ENST00000513509 211 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN7AQ01118 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN7AQ01118 MIR4781-201ENST00000585250 76 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 AC090953.1-201ENST00000604305 1092 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 AL135786.2-201ENST00000608422 615 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SCN7AQ01118 AC005539.1-201ENST00000443768 1479 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN7AQ01118 Y_RNA.796-201ENST00000364268 102 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 Y_RNA.799-201ENST00000364992 102 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 Y_RNA.508-201ENST00000384502 114 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN7AQ01118 MTCO3P30-201ENST00000426425 670 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 MTCYBP31-201ENST00000438855 1122 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 CLIC4P1-201ENST00000453177 535 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 HMGB3P15-201ENST00000507326 574 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.47□□□□□ -2.01
SCN7AQ01118 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN7AQ01118 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.47□□□□□ -2.01
SCN7AQ01118 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.47□□□□□ -2.01
SCN7AQ01118 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN7AQ01118 Y_RNA.783-201ENST00000613546 102 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 AC091953.2-201ENST00000623979 160 ntBASIC2.47□□□□□ -2.01
SCN7AQ01118 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.46□□□□□ -2.02
SCN7AQ01118 LUZP4P1-201ENST00000415420 344 ntBASIC2.46□□□□□ -2.02
SCN7AQ01118 AC005517.2-201ENST00000424673 553 ntBASIC2.46□□□□□ -2.02
SCN7AQ01118 SETP8-201ENST00000435341 628 ntBASIC2.46□□□□□ -2.02
SCN7AQ01118 AC017007.3-201ENST00000479865 435 ntBASIC2.46□□□□□ -2.02
SCN7AQ01118 AC007182.2-201ENST00000489251 402 ntBASIC2.46□□□□□ -2.02
SCN7AQ01118 RNU6-1053P-201ENST00000515930 101 ntBASIC2.46□□□□□ -2.02
SCN7AQ01118 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN7AQ01118 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN7AQ01118 AC068790.3-201ENST00000602988 553 ntBASIC2.46□□□□□ -2.02
SCN7AQ01118 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.46□□□□□ -2.02
SCN7AQ01118 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.46□□□□□ -2.02
SCN7AQ01118 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SCN7AQ01118 AP001148.1-201ENST00000624124 2359 ntBASIC2.45□□□□□ -2.02
SCN7AQ01118 Y_RNA.269-201ENST00000364685 89 ntBASIC2.45□□□□□ -2.02
SCN7AQ01118 FABP5P13-201ENST00000452144 328 ntBASIC2.45□□□□□ -2.02
SCN7AQ01118 AP000852.1-201ENST00000472460 573 ntBASIC2.45□□□□□ -2.02
SCN7AQ01118 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SCN7AQ01118 TRAV11-201ENST00000539512 339 ntBASIC2.45□□□□□ -2.02
SCN7AQ01118 OR4U1P-201ENST00000554958 912 ntBASIC2.45□□□□□ -2.02
SCN7AQ01118 MIR4512-201ENST00000583257 77 ntBASIC2.45□□□□□ -2.02
SCN7AQ01118 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN7AQ01118 AC073387.2-201ENST00000604797 784 ntBASIC2.45□□□□□ -2.02
SCN7AQ01118 AP004372.1-201ENST00000604842 844 ntBASIC2.45□□□□□ -2.02
SCN7AQ01118 CR382285.2-201ENST00000624662 1495 ntBASIC2.45□□□□□ -2.02
SCN7AQ01118 RNA5SP181-201ENST00000410246 98 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 RNU6-603P-201ENST00000411403 107 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SCN7AQ01118 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN7AQ01118 AL358453.1-201ENST00000422522 250 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 RPL7P31-201ENST00000450192 724 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 GZMAP1-201ENST00000503054 631 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.44□□□□□ -2.02
SCN7AQ01118 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.44□□□□□ -2.02
SCN7AQ01118 AC012531.5-201ENST00000611375 151 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN7AQ01118 MTCO1P14-201ENST00000441695 1559 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN7AQ01118 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SCN7AQ01118 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SCN7AQ01118 AC048351.1-201ENST00000420064 602 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.44□□□□□ -2.02
SCN7AQ01118 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN7AQ01118 ELOCP10-201ENST00000440624 327 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 RPL23AP7-203ENST00000449021 469 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 AC022431.1-201ENST00000450941 438 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 AC233279.1-201ENST00000455300 423 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN7AQ01118 SNRPGP19-201ENST00000603826 189 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 ELOCP34-201ENST00000604436 327 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 AC009318.3-201ENST00000616916 503 ntBASIC2.44□□□□□ -2.02
SCN7AQ01118 AF127577.6-201ENST00000623352 2191 ntBASIC2.43□□□□□ -2.02
SCN7AQ01118 AC011155.1-201ENST00000316512 456 ntBASIC2.43□□□□□ -2.02
SCN7AQ01118 AL627390.1-201ENST00000396055 340 ntBASIC2.43□□□□□ -2.02
SCN7AQ01118 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.43□□□□□ -2.02
SCN7AQ01118 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.43□□□□□ -2.02
SCN7AQ01118 AC009414.1-201ENST00000427200 443 ntBASIC2.43□□□□□ -2.02
SCN7AQ01118 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
SCN7AQ01118 TTC39CP1-201ENST00000512513 755 ntBASIC2.43□□□□□ -2.02
SCN7AQ01118 SNORD116-26-201ENST00000516006 96 ntBASIC2.43□□□□□ -2.02
SCN7AQ01118 SCARNA17.1-201ENST00000516211 143 ntBASIC2.43□□□□□ -2.02
SCN7AQ01118 SCARNA17.2-201ENST00000516334 143 ntBASIC2.43□□□□□ -2.02
SCN7AQ01118 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.43□□□□□ -2.02
SCN7AQ01118 AC011611.5-201ENST00000552477 578 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms