Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.13□□□□□ -1.91
CBX1P83916 PTP4A1P7-201ENST00000423476 514 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.13□□□□□ -1.91
CBX1P83916 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.13□□□□□ -1.91
CBX1P83916 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.13□□□□□ -1.91
CBX1P83916 Z95327.1-201ENST00000446082 482 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AC009961.3-201ENST00000449832 765 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.13□□□□□ -1.91
CBX1P83916 AC079776.3-201ENST00000450665 370 ntBASIC3.13□□□□□ -1.91
CBX1P83916 Z82190.1-201ENST00000454534 490 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.13□□□□□ -1.91
CBX1P83916 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.13□□□□□ -1.91
CBX1P83916 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.13□□□□□ -1.91
CBX1P83916 AC008427.1-201ENST00000503102 655 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.13□□□□□ -1.91
CBX1P83916 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CBX1P83916 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.13□□□□□ -1.91
CBX1P83916 RNU6-1028P-201ENST00000517164 93 ntBASIC3.13□□□□□ -1.91
CBX1P83916 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.13□□□□□ -1.91
CBX1P83916 MTND1P36-201ENST00000522384 936 ntBASIC3.13□□□□□ -1.91
CBX1P83916 DEFB130C-202ENST00000530001 230 ntBASIC3.13□□□□□ -1.91
CBX1P83916 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.13□□□□□ -1.91
CBX1P83916 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.13□□□□□ -1.91
CBX1P83916 HSPE1P5-201ENST00000561489 272 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AC053481.3-201ENST00000577881 843 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.13□□□□□ -1.91
CBX1P83916 AC024941.1-201ENST00000612250 334 ntBASIC3.13□□□□□ -1.91
CBX1P83916 CYCSP41-201ENST00000616920 296 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.13□□□□□ -1.91
CBX1P83916 AL356585.4-201ENST00000623078 1229 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AC010297.1-201ENST00000623948 149 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AP003476.1-201ENST00000623984 516 ntBASIC3.13□□□□□ -1.91
CBX1P83916 AC126544.2-201ENST00000625174 749 ntBASIC3.13□□□□□ -1.91
CBX1P83916 RNA5SP196-201ENST00000625967 102 ntBASIC3.13□□□□□ -1.91
CBX1P83916 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CBX1P83916 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CBX1P83916 RNU6-1155P-201ENST00000363554 107 ntBASIC3.12□□□□□ -1.91
CBX1P83916 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CBX1P83916 AL354719.1-201ENST00000406535 843 ntBASIC3.12□□□□□ -1.91
CBX1P83916 U3.42-201ENST00000408746 214 ntBASIC3.12□□□□□ -1.91
CBX1P83916 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.12□□□□□ -1.91
CBX1P83916 RNU6-1077P-201ENST00000410506 102 ntBASIC3.12□□□□□ -1.91
CBX1P83916 USP9YP21-201ENST00000420603 432 ntBASIC3.12□□□□□ -1.91
CBX1P83916 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CBX1P83916 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.12□□□□□ -1.91
CBX1P83916 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.12□□□□□ -1.91
CBX1P83916 RPL23AP74-201ENST00000437246 471 ntBASIC3.12□□□□□ -1.91
CBX1P83916 AC004866.2-201ENST00000438285 481 ntBASIC3.12□□□□□ -1.91
CBX1P83916 MRPL50P4-201ENST00000446432 475 ntBASIC3.12□□□□□ -1.91
CBX1P83916 AC112492.1-201ENST00000449607 712 ntBASIC3.12□□□□□ -1.91
CBX1P83916 PNPLA4P1-201ENST00000458328 305 ntBASIC3.12□□□□□ -1.91
CBX1P83916 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CBX1P83916 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.12□□□□□ -1.91
CBX1P83916 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.12□□□□□ -1.91
CBX1P83916 AC068724.1-201ENST00000487100 792 ntBASIC3.12□□□□□ -1.91
CBX1P83916 CAB39P1-201ENST00000502277 460 ntBASIC3.12□□□□□ -1.91
CBX1P83916 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CBX1P83916 CBX3P3-201ENST00000508108 532 ntBASIC3.12□□□□□ -1.91
CBX1P83916 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.12□□□□□ -1.91
CBX1P83916 NPM1P41-201ENST00000512920 831 ntBASIC3.12□□□□□ -1.91
CBX1P83916 AC090136.1-201ENST00000520009 240 ntBASIC3.12□□□□□ -1.91
CBX1P83916 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.12□□□□□ -1.91
CBX1P83916 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CBX1P83916 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.12□□□□□ -1.91
CBX1P83916 AC125611.1-201ENST00000549563 229 ntBASIC3.12□□□□□ -1.91
CBX1P83916 AP005205.1-201ENST00000563503 508 ntBASIC3.12□□□□□ -1.91
CBX1P83916 AC104072.1-201ENST00000568817 668 ntBASIC3.12□□□□□ -1.91
CBX1P83916 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CBX1P83916 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.12□□□□□ -1.91
CBX1P83916 AC136624.4-201ENST00000573044 370 ntBASIC3.12□□□□□ -1.91
CBX1P83916 RN7SL339P-201ENST00000580597 296 ntBASIC3.12□□□□□ -1.91
CBX1P83916 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.12□□□□□ -1.91
CBX1P83916 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
CBX1P83916 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.12□□□□□ -1.91
CBX1P83916 AC006111.3-201ENST00000622137 383 ntBASIC3.12□□□□□ -1.91
CBX1P83916 FO624990.1-201ENST00000636373 85 ntBASIC3.12□□□□□ -1.91
CBX1P83916 AL136520.1-201ENST00000600311 1322 ntBASIC3.12□□□□□ -1.91
CBX1P83916 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CBX1P83916 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CBX1P83916 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.11□□□□□ -1.91
CBX1P83916 RNU1-109P-201ENST00000383960 147 ntBASIC3.11□□□□□ -1.91
CBX1P83916 SNRPEP2-201ENST00000397592 279 ntBASIC3.11□□□□□ -1.91
CBX1P83916 RPS3AP26-201ENST00000398259 784 ntBASIC3.11□□□□□ -1.91
CBX1P83916 MTCO1P56-201ENST00000401674 224 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AC096533.1-201ENST00000411645 353 ntBASIC3.11□□□□□ -1.91
CBX1P83916 SSXP9-201ENST00000417503 292 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.11□□□□□ -1.91
CBX1P83916 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.11□□□□□ -1.91
CBX1P83916 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.11□□□□□ -1.91
CBX1P83916 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.11□□□□□ -1.91
CBX1P83916 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CBX1P83916 RNA5SP310-201ENST00000459084 116 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AC103987.1-201ENST00000473394 348 ntBASIC3.11□□□□□ -1.91
CBX1P83916 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.11□□□□□ -1.91
CBX1P83916 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.11□□□□□ -1.91
CBX1P83916 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.11□□□□□ -1.91
CBX1P83916 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CBX1P83916 ARL4AP2-201ENST00000507378 601 ntBASIC3.11□□□□□ -1.91
CBX1P83916 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.11□□□□□ -1.91
CBX1P83916 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms