Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.97□□□□□ -1.77
RAE1P78406 OR51K1P-201ENST00000510214 950 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AC017037.2-201ENST00000513850 890 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.97□□□□□ -1.77
RAE1P78406 OR4P1P-201ENST00000530808 1136 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AC105233.3-201ENST00000531125 744 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.97□□□□□ -1.77
RAE1P78406 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.97□□□□□ -1.77
RAE1P78406 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.97□□□□□ -1.77
RAE1P78406 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.97□□□□□ -1.77
RAE1P78406 MIR5096-201ENST00000583713 70 ntBASIC3.97□□□□□ -1.77
RAE1P78406 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 AL161729.3-201ENST00000603533 673 ntBASIC3.97□□□□□ -1.77
RAE1P78406 LLPHP1-201ENST00000603571 367 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AC011451.2-201ENST00000604303 598 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AL356218.2-201ENST00000605264 187 ntBASIC3.97□□□□□ -1.77
RAE1P78406 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.97□□□□□ -1.77
RAE1P78406 AL161734.1-201ENST00000609720 557 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AL590282.1-201ENST00000610379 1136 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AL159972.1-201ENST00000625150 448 ntBASIC3.97□□□□□ -1.77
RAE1P78406 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.97□□□□□ -1.77
RAE1P78406 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.97□□□□□ -1.77
RAE1P78406 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 NMD3P1-201ENST00000439704 1488 ntBASIC3.97□□□□□ -1.77
RAE1P78406 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RAE1P78406 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RAE1P78406 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RAE1P78406 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RAE1P78406 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.96□□□□□ -1.77
RAE1P78406 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RAE1P78406 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 AC090229.1-201ENST00000590983 1609 ntBASIC3.96□□□□□ -1.78
RAE1P78406 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAE1P78406 ZNF962P-201ENST00000443465 3140 ntBASIC3.96□□□□□ -1.78
RAE1P78406 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAE1P78406 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RAE1P78406 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAE1P78406 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAE1P78406 Y_RNA.1-201ENST00000352915 104 ntBASIC3.96□□□□□ -1.78
RAE1P78406 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RAE1P78406 Y_RNA.9-201ENST00000362354 101 ntBASIC3.96□□□□□ -1.78
RAE1P78406 SNORD74.4-201ENST00000364129 80 ntBASIC3.96□□□□□ -1.78
RAE1P78406 RNA5SP509-201ENST00000364577 119 ntBASIC3.96□□□□□ -1.78
RAE1P78406 RNU4-12P-201ENST00000365233 139 ntBASIC3.96□□□□□ -1.78
RAE1P78406 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAE1P78406 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RAE1P78406 CALM2P3-201ENST00000400429 449 ntBASIC3.96□□□□□ -1.78
RAE1P78406 AL078595.1-201ENST00000404458 226 ntBASIC3.96□□□□□ -1.78
RAE1P78406 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.96□□□□□ -1.78
RAE1P78406 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.96□□□□□ -1.78
RAE1P78406 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.96□□□□□ -1.78
RAE1P78406 MTCO2P11-201ENST00000431069 680 ntBASIC3.96□□□□□ -1.78
RAE1P78406 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAE1P78406 FTH1P1-201ENST00000437933 532 ntBASIC3.96□□□□□ -1.78
RAE1P78406 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 AC009963.2-201ENST00000453431 138 ntBASIC3.96□□□□□ -1.78
RAE1P78406 RPL38P1-201ENST00000460914 211 ntBASIC3.96□□□□□ -1.78
RAE1P78406 AC010469.1-201ENST00000463864 576 ntBASIC3.96□□□□□ -1.78
RAE1P78406 RN7SL738P-201ENST00000470264 297 ntBASIC3.96□□□□□ -1.78
RAE1P78406 RPS3AP14-201ENST00000483907 780 ntBASIC3.96□□□□□ -1.78
RAE1P78406 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 AC019235.1-201ENST00000503847 207 ntBASIC3.96□□□□□ -1.78
RAE1P78406 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 FAM92A1P1-201ENST00000528023 890 ntBASIC3.96□□□□□ -1.78
RAE1P78406 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.96□□□□□ -1.78
RAE1P78406 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.96□□□□□ -1.78
RAE1P78406 AC022655.2-201ENST00000577280 318 ntBASIC3.96□□□□□ -1.78
RAE1P78406 MIR4330-201ENST00000579077 105 ntBASIC3.96□□□□□ -1.78
RAE1P78406 MIR3146-201ENST00000580367 79 ntBASIC3.96□□□□□ -1.78
RAE1P78406 AC007448.1-201ENST00000582714 234 ntBASIC3.96□□□□□ -1.78
RAE1P78406 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RAE1P78406 AC008638.3-201ENST00000603341 463 ntBASIC3.96□□□□□ -1.78
RAE1P78406 MIR98-201ENST00000606724 119 ntBASIC3.96□□□□□ -1.78
RAE1P78406 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 U73479.1-201ENST00000618062 168 ntBASIC3.96□□□□□ -1.78
RAE1P78406 AC091905.1-201ENST00000624400 311 ntBASIC3.96□□□□□ -1.78
RAE1P78406 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RAE1P78406 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RAE1P78406 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
RAE1P78406 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 MARK2P15-201ENST00000432204 2186 ntBASIC3.96□□□□□ -1.78
RAE1P78406 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RAE1P78406 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAE1P78406 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
RAE1P78406 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.95□□□□□ -1.78
RAE1P78406 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.95□□□□□ -1.78
RAE1P78406 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.95□□□□□ -1.78
RAE1P78406 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms