Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC245517.4-201ENST00000448601 281 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
ABCA4P78363 RNA5SP385-201ENST00000515947 110 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.93□□□□□ -2.1
ABCA4P78363 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.93□□□□□ -2.1
ABCA4P78363 OR4U1P-201ENST00000554958 912 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 AC234775.3-201ENST00000564612 656 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 MTND4LP24-201ENST00000572277 291 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 TPMTP1-201ENST00000592307 737 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 AC023043.3-201ENST00000593113 385 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 AC128687.1-201ENST00000605304 619 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.93□□□□□ -2.1
ABCA4P78363 MIR8070-201ENST00000616510 88 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 AL133370.2-201ENST00000619934 439 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ABCA4P78363 AL359893.1-201ENST00000447628 1580 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 AL355596.1-201ENST00000565399 3996 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ABCA4P78363 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
ABCA4P78363 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ABCA4P78363 SNORA25.6-201ENST00000364121 118 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 RNU6-532P-201ENST00000384318 107 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 SAR1AP4-201ENST00000429225 591 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 UBE2V2P1-201ENST00000434717 398 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 RPL36AP6-201ENST00000435770 321 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 AC004866.2-201ENST00000438285 481 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 TPMTP4-201ENST00000450749 678 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.92□□□□□ -2.1
ABCA4P78363 HSPE1P18-201ENST00000517602 280 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.92□□□□□ -2.1
ABCA4P78363 AC010198.2-201ENST00000550612 259 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.92□□□□□ -2.1
ABCA4P78363 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCA4P78363 AL110115.1-201ENST00000614396 364 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ABCA4P78363 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.92□□□□□ -2.1
ABCA4P78363 Z82209.1-201ENST00000422141 2135 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ABCA4P78363 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ABCA4P78363 MIR378A-201ENST00000362177 66 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCA4P78363 AL513175.2-201ENST00000422071 443 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 PTP4A1P7-201ENST00000423476 514 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 HMGN2P20-201ENST00000437531 273 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.92□□□□□ -2.1
ABCA4P78363 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCA4P78363 MTND2P8-201ENST00000450555 1025 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCA4P78363 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCA4P78363 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCA4P78363 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 HMGB1P1-201ENST00000522557 636 ntBASIC1.92□□□□□ -2.1
ABCA4P78363 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
ABCA4P78363 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCA4P78363 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ABCA4P78363 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.91□□□□□ -2.1
ABCA4P78363 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
ABCA4P78363 AL021368.2-201ENST00000606125 5352 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.91□□□□□ -2.1
ABCA4P78363 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ABCA4P78363 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ABCA4P78363 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
ABCA4P78363 SNORD65-201ENST00000391079 73 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 RNA5SP498-201ENST00000411342 120 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.91□□□□□ -2.1
ABCA4P78363 CKS1BP5-201ENST00000434172 273 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 HMGB1P12-201ENST00000438594 598 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ABCA4P78363 AC104472.2-201ENST00000469035 601 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 LINC00888-204ENST00000487386 421 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.91□□□□□ -2.1
ABCA4P78363 AP001207.1-201ENST00000524051 481 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ABCA4P78363 OR4T1P-201ENST00000554933 911 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 AC010735.1-201ENST00000567305 1026 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 OR4K7P-201ENST00000580232 945 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 AC245517.5-201ENST00000611529 162 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.91□□□□□ -2.1
ABCA4P78363 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.91□□□□□ -2.1
ABCA4P78363 Y_RNA.508-201ENST00000384502 114 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 MIR153-1-201ENST00000384914 90 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ABCA4P78363 SNORA11.4-201ENST00000408823 129 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.91□□□□□ -2.1
ABCA4P78363 MTCYBP7-201ENST00000419540 1134 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.91□□□□□ -2.1
ABCA4P78363 TRIM60P18-201ENST00000441518 828 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.91□□□□□ -2.1
ABCA4P78363 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.91□□□□□ -2.1
ABCA4P78363 SNRPGP15-201ENST00000600149 222 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 AC069234.5-201ENST00000611056 416 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
ABCA4P78363 MIR4496-201ENST00000635896 61 ntBASIC1.91□□□□□ -2.1
ABCA4P78363 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ABCA4P78363 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
ABCA4P78363 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
ABCA4P78363 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
ABCA4P78363 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.9□□□□□ -2.11
ABCA4P78363 RNY1P10-201ENST00000363268 113 ntBASIC1.9□□□□□ -2.11
ABCA4P78363 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms