Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDL3P58872 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.55□□□□□ -1.68
RHBDL3P58872 AL117351.1-201ENST00000438864 766 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 RPS3AP22-201ENST00000488297 769 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 STMN1P2-201ENST00000508435 439 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 RAC1P2-201ENST00000511164 579 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 OR5M7P-201ENST00000526140 972 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.55□□□□□ -1.68
RHBDL3P58872 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.55□□□□□ -1.68
RHBDL3P58872 AC145350.1-201ENST00000567426 208 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 AC009101.1-201ENST00000568135 242 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 MIR3921-201ENST00000577308 85 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 BDH2P1-201ENST00000602288 736 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 AP001429.1-201ENST00000602568 530 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 AC097468.3-201ENST00000607956 456 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 AC244100.1-202ENST00000621554 382 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 AC009812.4-201ENST00000569134 1805 ntBASIC4.55□□□□□ -1.68
RHBDL3P58872 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RHBDL3P58872 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHBDL3P58872 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDL3P58872 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDL3P58872 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDL3P58872 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDL3P58872 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDL3P58872 AC027290.2-201ENST00000623210 18662 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 SNORA63.1-201ENST00000362493 131 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RHBDL3P58872 AC024082.2-201ENST00000434771 238 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 RSU1P2-202ENST00000437884 485 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDL3P58872 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDL3P58872 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDL3P58872 AC098824.1-201ENST00000453565 980 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 RNU7-170P-201ENST00000459303 61 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDL3P58872 AP003497.1-201ENST00000528472 562 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDL3P58872 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDL3P58872 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.54□□□□□ -1.68
RHBDL3P58872 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.54□□□□□ -1.68
RHBDL3P58872 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.54□□□□□ -1.68
RHBDL3P58872 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.54□□□□□ -1.68
RHBDL3P58872 AP005205.1-201ENST00000563503 508 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 AC090616.2-202ENST00000584248 222 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.54□□□□□ -1.68
RHBDL3P58872 AC018638.7-201ENST00000605836 1114 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 SNORA62.6-201ENST00000606322 83 ntBASIC4.54□□□□□ -1.68
RHBDL3P58872 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDL3P58872 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDL3P58872 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RHBDL3P58872 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDL3P58872 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.54□□□□□ -1.68
RHBDL3P58872 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
RHBDL3P58872 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RHBDL3P58872 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHBDL3P58872 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDL3P58872 AC092326.2-201ENST00000624772 1561 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDL3P58872 AL513185.3-201ENST00000433335 1300 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDL3P58872 MIR448-201ENST00000362131 111 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDL3P58872 RNU6-637P-201ENST00000384050 107 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AL593851.1-201ENST00000426171 157 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.53□□□□□ -1.68
RHBDL3P58872 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.53□□□□□ -1.68
RHBDL3P58872 KCTD9P3-201ENST00000434597 1169 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 RPL35AP22-201ENST00000436855 335 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 THAP5P1-201ENST00000439089 262 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDL3P58872 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.53□□□□□ -1.68
RHBDL3P58872 AL592447.1-201ENST00000447592 540 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AL451050.1-201ENST00000450126 415 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 MTCO3P16-201ENST00000454456 754 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AP1S2P1-201ENST00000457344 379 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 MTCO2P6-201ENST00000463134 685 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 RPS23P3-201ENST00000470993 430 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AC108860.1-201ENST00000484521 383 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.53□□□□□ -1.68
RHBDL3P58872 LTV1P1-201ENST00000510683 1237 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.53□□□□□ -1.68
RHBDL3P58872 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.53□□□□□ -1.68
RHBDL3P58872 ARL2BPP6-201ENST00000512757 439 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 MRPS33P3-201ENST00000513456 322 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.53□□□□□ -1.68
RHBDL3P58872 DUXAP5-201ENST00000529668 529 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDL3P58872 AC008015.1-201ENST00000555505 465 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AC034268.2-201ENST00000571784 482 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 MIR3922-201ENST00000585192 84 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AC012603.1-201ENST00000606424 528 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDL3P58872 AL360219.1-201ENST00000610230 366 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AC004223.4-201ENST00000612426 332 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDL3P58872 AC127502.3-201ENST00000636170 1206 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RHBDL3P58872 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDL3P58872 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms