Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SNORA9.2-201ENST00000365361 133 ntBASIC3.02□□□□□ -1.93
CDH6P55285 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
CDH6P55285 RN7SKP123-201ENST00000410732 291 ntBASIC3.02□□□□□ -1.93
CDH6P55285 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.02□□□□□ -1.93
CDH6P55285 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH6P55285 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.02□□□□□ -1.93
CDH6P55285 AC022018.1-201ENST00000430685 241 ntBASIC3.02□□□□□ -1.93
CDH6P55285 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.02□□□□□ -1.93
CDH6P55285 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH6P55285 AC241584.1-201ENST00000438469 1241 ntBASIC3.02□□□□□ -1.93
CDH6P55285 AL592437.1-201ENST00000443781 492 ntBASIC3.02□□□□□ -1.93
CDH6P55285 MOB1AP2-201ENST00000446060 614 ntBASIC3.02□□□□□ -1.93
CDH6P55285 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH6P55285 AL445669.2-201ENST00000454425 421 ntBASIC3.02□□□□□ -1.93
CDH6P55285 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH6P55285 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH6P55285 snoU13.22-201ENST00000459428 104 ntBASIC3.02□□□□□ -1.93
CDH6P55285 AC026412.2-201ENST00000512270 1075 ntBASIC3.02□□□□□ -1.93
CDH6P55285 RNU6-885P-201ENST00000516607 104 ntBASIC3.02□□□□□ -1.93
CDH6P55285 SNORA70.24-201ENST00000517233 118 ntBASIC3.02□□□□□ -1.93
CDH6P55285 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH6P55285 ERHP1-201ENST00000523006 310 ntBASIC3.02□□□□□ -1.93
CDH6P55285 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH6P55285 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
CDH6P55285 AC131902.3-201ENST00000611767 581 ntBASIC3.02□□□□□ -1.93
CDH6P55285 AL020991.1-201ENST00000612314 373 ntBASIC3.02□□□□□ -1.93
CDH6P55285 AC006111.3-201ENST00000622137 383 ntBASIC3.02□□□□□ -1.93
CDH6P55285 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CDH6P55285 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDH6P55285 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH6P55285 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH6P55285 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH6P55285 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
CDH6P55285 GDI2P1-201ENST00000429312 1336 ntBASIC3.01□□□□□ -1.93
CDH6P55285 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CDH6P55285 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH6P55285 SNORA51.6-201ENST00000384151 125 ntBASIC3.01□□□□□ -1.93
CDH6P55285 RNU6-851P-201ENST00000384565 107 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AL451074.5-201ENST00000415894 435 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH6P55285 AC079780.1-201ENST00000428259 207 ntBASIC3.01□□□□□ -1.93
CDH6P55285 UBE2V1P6-201ENST00000430840 422 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AC112492.1-201ENST00000449607 712 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AL590639.1-201ENST00000456484 337 ntBASIC3.01□□□□□ -1.93
CDH6P55285 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH6P55285 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH6P55285 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH6P55285 AC084024.2-201ENST00000503480 791 ntBASIC3.01□□□□□ -1.93
CDH6P55285 RNA5SP341-201ENST00000516261 117 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH6P55285 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH6P55285 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH6P55285 AC006518.2-201ENST00000542513 940 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AC098483.2-201ENST00000603158 454 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AC012669.1-201ENST00000603209 283 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AC010738.1-201ENST00000604970 987 ntBASIC3.01□□□□□ -1.93
CDH6P55285 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH6P55285 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH6P55285 VN1R74P-201ENST00000613259 503 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AL162274.2-201ENST00000614406 332 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AC107308.1-201ENST00000615897 301 ntBASIC3.01□□□□□ -1.93
CDH6P55285 AC231759.1-201ENST00000616455 597 ntBASIC3.01□□□□□ -1.93
CDH6P55285 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH6P55285 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH6P55285 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.01□□□□□ -1.93
CDH6P55285 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CDH6P55285 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH6P55285 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH6P55285 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH6P55285 AC092435.3-201ENST00000565538 3654 ntBASIC3□□□□□ -1.93
CDH6P55285 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3□□□□□ -1.93
CDH6P55285 RNU6-839P-201ENST00000363347 108 ntBASIC3□□□□□ -1.93
CDH6P55285 RNA5SP387-201ENST00000364226 106 ntBASIC3□□□□□ -1.93
CDH6P55285 SNORA51.4-201ENST00000364993 124 ntBASIC3□□□□□ -1.93
CDH6P55285 RNU1-140P-201ENST00000365040 165 ntBASIC3□□□□□ -1.93
CDH6P55285 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3□□□□□ -1.93
CDH6P55285 MTATP6P4-201ENST00000427725 675 ntBASIC3□□□□□ -1.93
CDH6P55285 SEPT14P24-201ENST00000447236 180 ntBASIC3□□□□□ -1.93
CDH6P55285 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH6P55285 AC083906.5-201ENST00000503722 328 ntBASIC3□□□□□ -1.93
CDH6P55285 SCGB1D5P-201ENST00000515134 247 ntBASIC3□□□□□ -1.93
CDH6P55285 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
CDH6P55285 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
CDH6P55285 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3□□□□□ -1.93
CDH6P55285 AC087272.1-201ENST00000523624 533 ntBASIC3□□□□□ -1.93
CDH6P55285 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3□□□□□ -1.93
CDH6P55285 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3□□□□□ -1.93
CDH6P55285 AC074050.1-201ENST00000563247 211 ntBASIC3□□□□□ -1.93
CDH6P55285 AC090666.1-201ENST00000578241 445 ntBASIC3□□□□□ -1.93
CDH6P55285 AC009220.3-201ENST00000604318 586 ntBASIC3□□□□□ -1.93
CDH6P55285 AC008083.4-201ENST00000615076 444 ntBASIC3□□□□□ -1.93
CDH6P55285 ATP5A1P2-202ENST00000616464 443 ntBASIC3□□□□□ -1.93
CDH6P55285 AC022509.4-201ENST00000621404 572 ntBASIC3□□□□□ -1.93
CDH6P55285 AC091953.5-201ENST00000622919 233 ntBASIC3□□□□□ -1.93
CDH6P55285 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3□□□□□ -1.93
CDH6P55285 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3□□□□□ -1.93
CDH6P55285 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3□□□□□ -1.93
CDH6P55285 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
CDH6P55285 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDH6P55285 AC090740.1-201ENST00000623193 2262 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms