Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MSH6P52701 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MSH6P52701 AL024474.1-201ENST00000404655 591 ntBASIC3.44□□□□□ -1.86
MSH6P52701 RN7SKP123-201ENST00000410732 291 ntBASIC3.44□□□□□ -1.86
MSH6P52701 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.44□□□□□ -1.86
MSH6P52701 AC093151.1-201ENST00000427711 313 ntBASIC3.44□□□□□ -1.86
MSH6P52701 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.44□□□□□ -1.86
MSH6P52701 RPL23AP11-201ENST00000475260 469 ntBASIC3.44□□□□□ -1.86
MSH6P52701 AC008494.2-201ENST00000514544 370 ntBASIC3.44□□□□□ -1.86
MSH6P52701 AP001207.1-201ENST00000524051 481 ntBASIC3.44□□□□□ -1.86
MSH6P52701 AL355836.1-201ENST00000555951 870 ntBASIC3.44□□□□□ -1.86
MSH6P52701 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.44□□□□□ -1.86
MSH6P52701 AC007687.1-201ENST00000602704 304 ntBASIC3.44□□□□□ -1.86
MSH6P52701 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.44□□□□□ -1.86
MSH6P52701 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
MSH6P52701 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.44□□□□□ -1.86
MSH6P52701 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
MSH6P52701 DCAF13P3-201ENST00000561147 1334 ntBASIC3.44□□□□□ -1.86
MSH6P52701 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.43□□□□□ -1.86
MSH6P52701 MTND5P11-201ENST00000511037 1812 ntBASIC3.43□□□□□ -1.86
MSH6P52701 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MSH6P52701 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.43□□□□□ -1.86
MSH6P52701 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MSH6P52701 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MSH6P52701 RNU6-543P-201ENST00000362576 108 ntBASIC3.43□□□□□ -1.86
MSH6P52701 SNORA51.4-201ENST00000364993 124 ntBASIC3.43□□□□□ -1.86
MSH6P52701 DYNLT3P1-201ENST00000378574 347 ntBASIC3.43□□□□□ -1.86
MSH6P52701 AL512633.1-201ENST00000399931 655 ntBASIC3.43□□□□□ -1.86
MSH6P52701 HMGB3P31-201ENST00000413333 595 ntBASIC3.43□□□□□ -1.86
MSH6P52701 AC080125.1-201ENST00000414888 684 ntBASIC3.43□□□□□ -1.86
MSH6P52701 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.43□□□□□ -1.86
MSH6P52701 PNRC2P1-201ENST00000423940 420 ntBASIC3.43□□□□□ -1.86
MSH6P52701 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.43□□□□□ -1.86
MSH6P52701 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.43□□□□□ -1.86
MSH6P52701 RPS7P5-201ENST00000441482 581 ntBASIC3.43□□□□□ -1.86
MSH6P52701 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.43□□□□□ -1.86
MSH6P52701 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.43□□□□□ -1.86
MSH6P52701 RPL23AP42-201ENST00000471152 471 ntBASIC3.43□□□□□ -1.86
MSH6P52701 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.43□□□□□ -1.86
MSH6P52701 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.43□□□□□ -1.86
MSH6P52701 AC116337.1-201ENST00000509680 687 ntBASIC3.43□□□□□ -1.86
MSH6P52701 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.43□□□□□ -1.86
MSH6P52701 AC133963.2-201ENST00000513686 578 ntBASIC3.43□□□□□ -1.86
MSH6P52701 SNORA76.2-201ENST00000517095 137 ntBASIC3.43□□□□□ -1.86
MSH6P52701 AC008562.1-201ENST00000521763 330 ntBASIC3.43□□□□□ -1.86
MSH6P52701 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.43□□□□□ -1.86
MSH6P52701 AC021269.2-201ENST00000532318 330 ntBASIC3.43□□□□□ -1.86
MSH6P52701 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.43□□□□□ -1.86
MSH6P52701 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.43□□□□□ -1.86
MSH6P52701 AP006248.3-201ENST00000623580 594 ntBASIC3.43□□□□□ -1.86
MSH6P52701 CR381653.2-201ENST00000624041 768 ntBASIC3.43□□□□□ -1.86
MSH6P52701 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.43□□□□□ -1.86
MSH6P52701 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.43□□□□□ -1.86
MSH6P52701 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MSH6P52701 RNU6-1005P-201ENST00000384519 107 ntBASIC3.42□□□□□ -1.86
MSH6P52701 HNRNPDP2-201ENST00000406475 478 ntBASIC3.42□□□□□ -1.86
MSH6P52701 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.42□□□□□ -1.86
MSH6P52701 USP9YP20-201ENST00000419224 558 ntBASIC3.42□□□□□ -1.86
MSH6P52701 AC023347.2-201ENST00000433994 462 ntBASIC3.42□□□□□ -1.86
MSH6P52701 MTCYBP31-201ENST00000438855 1122 ntBASIC3.42□□□□□ -1.86
MSH6P52701 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.42□□□□□ -1.86
MSH6P52701 AC104389.3-201ENST00000445629 235 ntBASIC3.42□□□□□ -1.86
MSH6P52701 HMGN1P5-201ENST00000448591 263 ntBASIC3.42□□□□□ -1.86
MSH6P52701 AL353718.1-201ENST00000451028 517 ntBASIC3.42□□□□□ -1.86
MSH6P52701 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.42□□□□□ -1.86
MSH6P52701 AC010468.3-201ENST00000508225 458 ntBASIC3.42□□□□□ -1.86
MSH6P52701 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.42□□□□□ -1.86
MSH6P52701 RNA5SP385-201ENST00000515947 110 ntBASIC3.42□□□□□ -1.86
MSH6P52701 RNU6-1102P-201ENST00000516149 96 ntBASIC3.42□□□□□ -1.86
MSH6P52701 OR8K2P-201ENST00000524645 927 ntBASIC3.42□□□□□ -1.86
MSH6P52701 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.42□□□□□ -1.86
MSH6P52701 AC027104.1-201ENST00000563702 681 ntBASIC3.42□□□□□ -1.86
MSH6P52701 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.42□□□□□ -1.86
MSH6P52701 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.42□□□□□ -1.86
MSH6P52701 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.42□□□□□ -1.86
MSH6P52701 MIR6873-201ENST00000622788 63 ntBASIC3.42□□□□□ -1.86
MSH6P52701 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
MSH6P52701 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MSH6P52701 MTND5P6-201ENST00000422338 1798 ntBASIC3.42□□□□□ -1.86
MSH6P52701 AC138915.3-201ENST00000562908 1389 ntBASIC3.41□□□□□ -1.86
MSH6P52701 RNA5SP167-201ENST00000365461 116 ntBASIC3.41□□□□□ -1.86
MSH6P52701 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
MSH6P52701 EIF5P1-201ENST00000400019 1231 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AL158825.1-201ENST00000414735 521 ntBASIC3.41□□□□□ -1.86
MSH6P52701 MORF4L1P6-201ENST00000418771 268 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AL121882.1-201ENST00000422893 417 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AC073310.1-201ENST00000423226 1033 ntBASIC3.41□□□□□ -1.86
MSH6P52701 MTND4P15-201ENST00000437913 1033 ntBASIC3.41□□□□□ -1.86
MSH6P52701 RNFT1P2-201ENST00000443064 757 ntBASIC3.41□□□□□ -1.86
MSH6P52701 AL590399.6-201ENST00000446396 307 ntBASIC3.41□□□□□ -1.86
MSH6P52701 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.41□□□□□ -1.86
MSH6P52701 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.41□□□□□ -1.86
MSH6P52701 AC096992.1-201ENST00000459808 709 ntBASIC3.41□□□□□ -1.86
MSH6P52701 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
MSH6P52701 AC104689.1-201ENST00000473356 768 ntBASIC3.41□□□□□ -1.86
MSH6P52701 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.41□□□□□ -1.86
MSH6P52701 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.41□□□□□ -1.86
MSH6P52701 RN7SKP82-201ENST00000516786 223 ntBASIC3.41□□□□□ -1.86
MSH6P52701 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.41□□□□□ -1.86
MSH6P52701 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms