Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 snoU109.4-201ENST00000458953 143 ntBASIC2.9□□□□□ -1.95
RFX3P48380 RNA5SP310-201ENST00000459084 116 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AC092902.1-201ENST00000486999 259 ntBASIC2.9□□□□□ -1.95
RFX3P48380 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.9□□□□□ -1.95
RFX3P48380 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.9□□□□□ -1.95
RFX3P48380 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.9□□□□□ -1.95
RFX3P48380 RN7SKP272-201ENST00000516988 232 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.9□□□□□ -1.95
RFX3P48380 AP001317.1-201ENST00000531194 960 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AL391156.1-201ENST00000554965 554 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.9□□□□□ -1.95
RFX3P48380 AC055876.1-202ENST00000567053 138 ntBASIC2.9□□□□□ -1.95
RFX3P48380 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.9□□□□□ -1.95
RFX3P48380 UBL5P2-201ENST00000583788 219 ntBASIC2.9□□□□□ -1.95
RFX3P48380 MIR4506-201ENST00000584693 77 ntBASIC2.9□□□□□ -1.95
RFX3P48380 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.9□□□□□ -1.95
RFX3P48380 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.9□□□□□ -1.95
RFX3P48380 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.9□□□□□ -1.95
RFX3P48380 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RFX3P48380 ZNF663P-202ENST00000641770 1131 ntBASIC2.9□□□□□ -1.95
RFX3P48380 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RFX3P48380 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RFX3P48380 AL353743.1-202ENST00000431724 1695 ntBASIC2.89□□□□□ -1.95
RFX3P48380 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.89□□□□□ -1.95
RFX3P48380 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFX3P48380 DYNLT3P1-201ENST00000378574 347 ntBASIC2.89□□□□□ -1.95
RFX3P48380 RNU6-657P-201ENST00000383904 107 ntBASIC2.89□□□□□ -1.95
RFX3P48380 MIR217-201ENST00000384817 110 ntBASIC2.89□□□□□ -1.95
RFX3P48380 ARF4P3-201ENST00000397387 509 ntBASIC2.89□□□□□ -1.95
RFX3P48380 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.89□□□□□ -1.95
RFX3P48380 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.89□□□□□ -1.95
RFX3P48380 RPL21P32-201ENST00000419877 477 ntBASIC2.89□□□□□ -1.95
RFX3P48380 USP9YP36-201ENST00000424581 829 ntBASIC2.89□□□□□ -1.95
RFX3P48380 AC013262.1-201ENST00000426710 252 ntBASIC2.89□□□□□ -1.95
RFX3P48380 MTCYBP34-201ENST00000439552 670 ntBASIC2.89□□□□□ -1.95
RFX3P48380 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX3P48380 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RFX3P48380 UQCRHP3-201ENST00000451503 251 ntBASIC2.89□□□□□ -1.95
RFX3P48380 AC109925.1-201ENST00000478069 331 ntBASIC2.89□□□□□ -1.95
RFX3P48380 RN7SL504P-201ENST00000494496 287 ntBASIC2.89□□□□□ -1.95
RFX3P48380 AC093801.2-201ENST00000503966 1050 ntBASIC2.89□□□□□ -1.95
RFX3P48380 AC026427.2-201ENST00000506228 536 ntBASIC2.89□□□□□ -1.95
RFX3P48380 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX3P48380 RNU6-1095P-201ENST00000516148 108 ntBASIC2.89□□□□□ -1.95
RFX3P48380 SNORA74D-201ENST00000516404 141 ntBASIC2.89□□□□□ -1.95
RFX3P48380 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX3P48380 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX3P48380 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.89□□□□□ -1.95
RFX3P48380 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.89□□□□□ -1.95
RFX3P48380 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX3P48380 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX3P48380 AL160281.1-201ENST00000605307 311 ntBASIC2.89□□□□□ -1.95
RFX3P48380 AC009570.1-201ENST00000609599 745 ntBASIC2.89□□□□□ -1.95
RFX3P48380 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.89□□□□□ -1.95
RFX3P48380 AC109454.4-201ENST00000623411 649 ntBASIC2.89□□□□□ -1.95
RFX3P48380 AC026422.1-201ENST00000623961 452 ntBASIC2.89□□□□□ -1.95
RFX3P48380 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX3P48380 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
RFX3P48380 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX3P48380 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RFX3P48380 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX3P48380 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.88□□□□□ -1.95
RFX3P48380 AP002907.1-201ENST00000606361 1430 ntBASIC2.88□□□□□ -1.95
RFX3P48380 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFX3P48380 SNORD15B-201ENST00000384714 146 ntBASIC2.88□□□□□ -1.95
RFX3P48380 RPL7P27-201ENST00000403775 720 ntBASIC2.88□□□□□ -1.95
RFX3P48380 RN7SKP123-201ENST00000410732 291 ntBASIC2.88□□□□□ -1.95
RFX3P48380 RNA5SP38-201ENST00000410750 119 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AC245054.2-201ENST00000415639 319 ntBASIC2.88□□□□□ -1.95
RFX3P48380 SSXP9-201ENST00000417503 292 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AC092634.6-201ENST00000418558 192 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AC027644.1-201ENST00000419595 298 ntBASIC2.88□□□□□ -1.95
RFX3P48380 Z93242.1-201ENST00000427102 353 ntBASIC2.88□□□□□ -1.95
RFX3P48380 MTCYBP32-201ENST00000427945 1084 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AL353705.1-201ENST00000433468 480 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AP000949.1-201ENST00000438328 629 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RFX3P48380 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX3P48380 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX3P48380 KLRA1P-201ENST00000503499 986 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.88□□□□□ -1.95
RFX3P48380 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.88□□□□□ -1.95
RFX3P48380 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.88□□□□□ -1.95
RFX3P48380 AC090502.2-201ENST00000549267 280 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX3P48380 MED28P6-201ENST00000558776 231 ntBASIC2.88□□□□□ -1.95
RFX3P48380 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFX3P48380 LARP7P2-201ENST00000575306 125 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AC126365.2-201ENST00000580630 379 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AP003973.1-201ENST00000604639 691 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AP005137.2-201ENST00000609238 400 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AC002076.2-201ENST00000617362 122 ntBASIC2.88□□□□□ -1.95
RFX3P48380 AC018692.3-201ENST00000623929 123 ntBASIC2.88□□□□□ -1.95
RFX3P48380 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.88□□□□□ -1.95
RFX3P48380 AC026634.1-201ENST00000634369 198 ntBASIC2.88□□□□□ -1.95
RFX3P48380 FAM35CP-201ENST00000554755 2470 ntBASIC2.88□□□□□ -1.95
RFX3P48380 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFX3P48380 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX3P48380 AC103988.1-201ENST00000566382 2177 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms