Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.73□□□□□ -1.97
CXCL12P48061 MIR4769-201ENST00000584126 77 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 ZNF861P-201ENST00000588126 639 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.73□□□□□ -1.97
CXCL12P48061 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.73□□□□□ -1.97
CXCL12P48061 AP002906.1-201ENST00000603405 233 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 AC092574.1-201ENST00000609771 420 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 CTSLP2-204ENST00000629029 392 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 MAPK10-362ENST00000641864 4484 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
CXCL12P48061 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CXCL12P48061 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CXCL12P48061 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
CXCL12P48061 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CXCL12P48061 RNA5SP383-201ENST00000362934 120 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 RNU6-353P-201ENST00000364266 108 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 SNORA3.2-201ENST00000408221 125 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 AC073264.1-201ENST00000411508 416 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 TAF13P2-201ENST00000416876 286 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.72□□□□□ -1.97
CXCL12P48061 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.72□□□□□ -1.97
CXCL12P48061 TOMM20P4-201ENST00000427861 435 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 PSMA2P3-201ENST00000429685 675 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 CKS1BP5-201ENST00000434172 273 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 AL513043.1-201ENST00000439124 535 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.72□□□□□ -1.97
CXCL12P48061 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.72□□□□□ -1.97
CXCL12P48061 Z77249.1-201ENST00000444622 1175 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 AL050341.1-201ENST00000447743 313 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 AC006539.3-201ENST00000454258 129 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.72□□□□□ -1.97
CXCL12P48061 NAP1L1P3-201ENST00000462291 880 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 RNU6-488P-201ENST00000515918 99 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.72□□□□□ -1.97
CXCL12P48061 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.72□□□□□ -1.97
CXCL12P48061 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.72□□□□□ -1.97
CXCL12P48061 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CXCL12P48061 AC006518.2-201ENST00000542513 940 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.72□□□□□ -1.97
CXCL12P48061 AL157700.1-201ENST00000561973 1432 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.72□□□□□ -1.97
CXCL12P48061 MTCYBP28-201ENST00000566728 1132 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.72□□□□□ -1.97
CXCL12P48061 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.72□□□□□ -1.97
CXCL12P48061 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.72□□□□□ -1.97
CXCL12P48061 AC008277.2-201ENST00000605196 797 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 HSPE1P14-201ENST00000605812 302 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 AP004247.3-201ENST00000608682 624 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.72□□□□□ -1.97
CXCL12P48061 MIR4496-201ENST00000635896 61 ntBASIC2.72□□□□□ -1.97
CXCL12P48061 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CXCL12P48061 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CXCL12P48061 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
CXCL12P48061 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL12P48061 MTND5P28-201ENST00000438005 1594 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL12P48061 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CXCL12P48061 RNU1-35P-201ENST00000362782 153 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 SNORD56.3-201ENST00000363507 71 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL12P48061 RNU6-356P-201ENST00000384140 107 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 SNORA36C-201ENST00000384289 132 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 MIR592-201ENST00000384959 97 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AL356057.3-201ENST00000402607 340 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 RPS4XP7-201ENST00000406274 780 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 RPL23AP47-201ENST00000408017 460 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 RN7SKP192-201ENST00000411291 327 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.71□□□□□ -1.98
CXCL12P48061 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.71□□□□□ -1.98
CXCL12P48061 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL12P48061 HMGB1P12-201ENST00000438594 598 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AL662791.1-201ENST00000441992 928 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 RPL23AP33-201ENST00000442301 452 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 NPM1P49-201ENST00000448027 714 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 HMGN1P5-201ENST00000448591 263 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL12P48061 AC091179.1-201ENST00000461606 579 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL12P48061 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL12P48061 AC087879.1-201ENST00000474343 374 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AC012181.1-201ENST00000479895 423 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.71□□□□□ -1.98
CXCL12P48061 AC011352.3-201ENST00000505162 593 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.71□□□□□ -1.98
CXCL12P48061 CENPUP2-201ENST00000555897 1186 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.71□□□□□ -1.98
CXCL12P48061 AC027176.1-201ENST00000560204 514 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AC010928.3-201ENST00000587712 541 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 DNAJC19P3-201ENST00000594491 331 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AC016542.1-201ENST00000608259 493 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.71□□□□□ -1.98
CXCL12P48061 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 AC093875.1-201ENST00000623688 504 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 GABRG2-229ENST00000641017 3628 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CXCL12P48061 AP000526.1-201ENST00000603308 1388 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CXCL12P48061 TAB3P1-202ENST00000452645 1634 ntBASIC2.71□□□□□ -1.98
CXCL12P48061 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms