Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MTATP6P19-201ENST00000413797 659 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 MUPP-201ENST00000438111 566 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 AC010627.1-201ENST00000503819 1294 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN4AP35499 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.84□□□□□ -1.95
SCN4AP35499 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SCN4AP35499 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN4AP35499 SNRPGP18-201ENST00000553000 214 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 AC135628.1-201ENST00000568867 534 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 VN1R84P-201ENST00000593697 235 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 ZNF92P3-201ENST00000596594 954 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 AC090525.3-201ENST00000605601 189 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 AC055764.2-201ENST00000610089 670 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.84□□□□□ -1.95
SCN4AP35499 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN4AP35499 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
SCN4AP35499 AC069528.2-201ENST00000624849 1991 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN4AP35499 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN4AP35499 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.84□□□□□ -1.96
SCN4AP35499 AP001486.2-201ENST00000561652 5113 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 RNU6-252P-201ENST00000363232 107 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 RNU6-666P-201ENST00000363499 107 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.84□□□□□ -1.96
SCN4AP35499 AL355379.1-201ENST00000405542 640 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.84□□□□□ -1.96
SCN4AP35499 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.84□□□□□ -1.96
SCN4AP35499 AC023128.2-201ENST00000420880 1223 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.84□□□□□ -1.96
SCN4AP35499 TPMTP4-201ENST00000450749 678 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 MTATP6P22-201ENST00000507369 598 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 AC008628.1-201ENST00000508663 265 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 AC112673.1-201ENST00000513168 575 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.84□□□□□ -1.96
SCN4AP35499 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SCN4AP35499 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.84□□□□□ -1.96
SCN4AP35499 AL450270.1-201ENST00000606160 391 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 AL627309.6-201ENST00000606857 840 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 Z99129.2-201ENST00000619967 314 ntBASIC2.84□□□□□ -1.96
SCN4AP35499 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN4AP35499 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN4AP35499 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SCN4AP35499 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN4AP35499 AL512646.1-201ENST00000269395 1077 ntBASIC2.83□□□□□ -1.96
SCN4AP35499 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN4AP35499 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN4AP35499 RPL23AP36-201ENST00000413895 458 ntBASIC2.83□□□□□ -1.96
SCN4AP35499 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.83□□□□□ -1.96
SCN4AP35499 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN4AP35499 CASP3P1-201ENST00000446037 609 ntBASIC2.83□□□□□ -1.96
SCN4AP35499 AC106872.3-201ENST00000495104 446 ntBASIC2.83□□□□□ -1.96
SCN4AP35499 RNU6-1004P-201ENST00000516584 111 ntBASIC2.83□□□□□ -1.96
SCN4AP35499 SNORA31.15-201ENST00000516771 132 ntBASIC2.83□□□□□ -1.96
SCN4AP35499 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.83□□□□□ -1.96
SCN4AP35499 AP000857.1-201ENST00000532151 543 ntBASIC2.83□□□□□ -1.96
SCN4AP35499 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.83□□□□□ -1.96
SCN4AP35499 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN4AP35499 AC004775.1-201ENST00000607389 753 ntBASIC2.83□□□□□ -1.96
SCN4AP35499 AL355802.4-201ENST00000607635 548 ntBASIC2.83□□□□□ -1.96
SCN4AP35499 AC083865.1-201ENST00000636634 831 ntBASIC2.83□□□□□ -1.96
SCN4AP35499 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN4AP35499 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SCN4AP35499 WWP1P1-201ENST00000466609 2769 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 ZNF355P-201ENST00000427301 3216 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SCN4AP35499 Y_RNA.338-201ENST00000365320 114 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 AC092745.2-202ENST00000411880 369 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.82□□□□□ -1.96
SCN4AP35499 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN4AP35499 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN4AP35499 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.82□□□□□ -1.96
SCN4AP35499 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.82□□□□□ -1.96
SCN4AP35499 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SCN4AP35499 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN4AP35499 AC068446.3-201ENST00000555285 382 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 MAGOH2P-202ENST00000584384 429 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 AC084824.5-201ENST00000612009 413 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 AC073569.3-201ENST00000619055 682 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 AC000123.2-201ENST00000623124 461 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 AC090617.9-201ENST00000623751 147 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 MIR1291-201ENST00000627649 87 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SCN4AP35499 SNORA80E-201ENST00000384744 137 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 RNU6-244P-201ENST00000391028 104 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 CCNB2P1-201ENST00000399411 1150 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 UBE2V1P15-201ENST00000407776 448 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 MIR1287-201ENST00000408492 90 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN4AP35499 AC009965.2-201ENST00000425328 970 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 AC107398.1-201ENST00000486904 505 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.82□□□□□ -1.96
SCN4AP35499 AL133271.1-201ENST00000538229 291 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 PCNAP1-202ENST00000595299 752 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 SUMO2P14-201ENST00000604488 293 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 AL391834.1-201ENST00000609609 560 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN4AP35499 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN4AP35499 HPVC1-201ENST00000629899 1198 ntBASIC2.82□□□□□ -1.96
SCN4AP35499 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCN4AP35499 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms