Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC092447.10-201ENST00000620607 1652 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AC002546.1-201ENST00000588041 2504 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXD13P35453 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
HOXD13P35453 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD13P35453 FRG1CP-201ENST00000358464 769 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD13P35453 RNU6-253P-201ENST00000384730 105 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 RNU6-882P-201ENST00000391025 103 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 RNU6ATAC-201ENST00000408749 126 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 RNU2-43P-201ENST00000410306 190 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AL159169.1-201ENST00000421119 127 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD13P35453 AL022400.1-201ENST00000423946 935 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD13P35453 ATP5JP1-201ENST00000431631 322 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD13P35453 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD13P35453 EEF1E1P1-201ENST00000446998 430 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 OR6K5P-201ENST00000447050 945 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 MTND1P31-201ENST00000449206 961 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AC073387.1-201ENST00000453261 709 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 RN7SL594P-201ENST00000470590 287 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AC118282.1-201ENST00000506408 765 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 MTCYBP43-201ENST00000513621 740 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 RNU6-714P-201ENST00000516963 103 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 MRPS36P3-201ENST00000519284 130 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD13P35453 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD13P35453 DUXAP6-201ENST00000553858 601 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD13P35453 AL391156.1-201ENST00000554965 554 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AC090888.2-201ENST00000559765 1144 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD13P35453 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD13P35453 AC012443.1-201ENST00000605605 231 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 AC092354.2-201ENST00000607786 514 ntBASIC3.87□□□□□ -1.79
HOXD13P35453 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD13P35453 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXD13P35453 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD13P35453 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXD13P35453 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD13P35453 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HOXD13P35453 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HOXD13P35453 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD13P35453 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD13P35453 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD13P35453 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD13P35453 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD13P35453 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD13P35453 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXD13P35453 RNU6-289P-201ENST00000364093 107 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD13P35453 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXD13P35453 AC119751.3-201ENST00000399720 670 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AL356421.1-201ENST00000403255 413 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AL136116.1-201ENST00000403591 381 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AP000567.1-201ENST00000406413 156 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 PIGPP2-201ENST00000411569 458 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXD13P35453 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD13P35453 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD13P35453 GOT2P5-201ENST00000433995 546 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 RBMY2UP-201ENST00000453474 324 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AC007537.2-201ENST00000472093 511 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 RPL7P23-201ENST00000493874 747 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AC147055.4-201ENST00000504399 745 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 HMGN1P11-201ENST00000508668 303 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AC093809.1-201ENST00000509155 340 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 PCBP2P3-201ENST00000509726 843 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXD13P35453 MTND5P4-201ENST00000514978 288 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXD13P35453 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXD13P35453 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXD13P35453 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD13P35453 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD13P35453 AC002400.1-201ENST00000569310 726 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD13P35453 AC013444.2-201ENST00000603317 787 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AC010591.1-201ENST00000603941 649 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AC072039.2-201ENST00000608883 439 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AL607023.1-201ENST00000620045 248 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 AC002550.2-201ENST00000621246 394 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXD13P35453 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXD13P35453 AP001148.1-201ENST00000624124 2359 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
HOXD13P35453 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD13P35453 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXD13P35453 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXD13P35453 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXD13P35453 AC104454.1-201ENST00000421341 1401 ntBASIC3.86□□□□□ -1.79
HOXD13P35453 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD13P35453 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.85□□□□□ -1.79
HOXD13P35453 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD13P35453 AF117829.1-206ENST00000621883 3802 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD13P35453 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms