Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HOXD12P35452 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD12P35452 RNA5SP235-201ENST00000365411 114 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 RNU6-1042P-201ENST00000384204 107 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 RNU6-348P-201ENST00000384386 107 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 MIR200C-201ENST00000384980 68 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 MIR449B-201ENST00000384995 97 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 SNORA74C-2-201ENST00000411179 201 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 TPMTP2-201ENST00000414372 726 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 ELOCP17-201ENST00000414751 326 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXD12P35452 RPL23AP74-201ENST00000437246 471 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXD12P35452 PDSS1P2-201ENST00000449397 678 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXD12P35452 HMGN2P7-201ENST00000456186 273 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AC090453.1-201ENST00000495560 436 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AC107401.1-201ENST00000503426 685 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXD12P35452 AF213884.2-201ENST00000510417 903 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 NDUFB4P9-201ENST00000511646 388 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 FTH1P21-201ENST00000512179 511 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXD12P35452 RNA5SP519-201ENST00000516480 119 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXD12P35452 HSPA8P13-201ENST00000523715 472 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AP002748.2-201ENST00000528671 348 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD12P35452 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXD12P35452 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXD12P35452 EIF1P4-201ENST00000572664 335 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 RN7SL703P-201ENST00000578485 302 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 NDUFA8P1-201ENST00000605525 367 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AC008966.2-201ENST00000606157 453 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 AC025588.4-201ENST00000615802 908 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXD12P35452 AC233309.1-201ENST00000619522 751 ntBASIC4.24□□□□□ -1.73
HOXD12P35452 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXD12P35452 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD12P35452 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD12P35452 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXD12P35452 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HOXD12P35452 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD12P35452 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HOXD12P35452 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HOXD12P35452 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD12P35452 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD12P35452 AC097504.1-201ENST00000515103 2415 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 RLIMP1-201ENST00000339626 1680 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD12P35452 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD12P35452 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD12P35452 RPL23AP57-201ENST00000332361 466 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD12P35452 MIR921-201ENST00000401133 56 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 RNU2-66P-201ENST00000410650 161 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 CRYBB2P1-203ENST00000415709 538 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 RAD23BP2-201ENST00000416003 1207 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD12P35452 AC012065.2-201ENST00000421295 375 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD12P35452 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXD12P35452 AC018644.1-201ENST00000429934 551 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXD12P35452 Z74696.2-201ENST00000436514 498 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 RPL23AP46-201ENST00000438548 490 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD12P35452 AL133547.1-201ENST00000448546 220 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD12P35452 VN1R17P-201ENST00000472048 1090 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 RPL23AP65-201ENST00000475608 468 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 AC096751.1-202ENST00000502691 1067 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD12P35452 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXD12P35452 MTND4LP18-201ENST00000526864 291 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD12P35452 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD12P35452 MIR4528-201ENST00000577763 90 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 SNORD84-203ENST00000584275 78 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD12P35452 RPL23AP92-201ENST00000603609 255 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 COX6CP4-201ENST00000605798 228 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 AC090186.1-201ENST00000605991 572 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD12P35452 AC006566.1-201ENST00000608943 513 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 AL445363.3-201ENST00000623080 671 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 AC091905.2-201ENST00000623143 306 ntBASIC4.23□□□□□ -1.73
HOXD12P35452 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.23□□□□□ -1.73
HOXD12P35452 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HOXD12P35452 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD12P35452 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD12P35452 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HOXD12P35452 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD12P35452 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HOXD12P35452 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD12P35452 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD12P35452 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD12P35452 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD12P35452 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXD12P35452 EXOC5P1-201ENST00000510543 1969 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms