Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.67□□□□□ -1.98
RPA3P35244 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.67□□□□□ -1.98
RPA3P35244 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RPA3P35244 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.67□□□□□ -1.98
RPA3P35244 VN1R88P-201ENST00000596787 292 ntBASIC2.67□□□□□ -1.98
RPA3P35244 AP001330.4-201ENST00000604350 154 ntBASIC2.67□□□□□ -1.98
RPA3P35244 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.67□□□□□ -1.98
RPA3P35244 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.67□□□□□ -1.98
RPA3P35244 AC010297.1-201ENST00000623948 149 ntBASIC2.67□□□□□ -1.98
RPA3P35244 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RPA3P35244 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RPA3P35244 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
RPA3P35244 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.66□□□□□ -1.98
RPA3P35244 RNU6-712P-201ENST00000410558 100 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AL592148.1-201ENST00000413568 445 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.66□□□□□ -1.98
RPA3P35244 AC093422.3-201ENST00000428506 305 ntBASIC2.66□□□□□ -1.98
RPA3P35244 PTP4A1P3-201ENST00000433661 420 ntBASIC2.66□□□□□ -1.98
RPA3P35244 SETP8-201ENST00000435341 628 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AC105272.1-201ENST00000438604 198 ntBASIC2.66□□□□□ -1.98
RPA3P35244 RNU6-775P-201ENST00000459318 96 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AC133134.1-201ENST00000466800 359 ntBASIC2.66□□□□□ -1.98
RPA3P35244 SRIP1-201ENST00000489235 288 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.66□□□□□ -1.98
RPA3P35244 AC026801.2-201ENST00000515352 425 ntBASIC2.66□□□□□ -1.98
RPA3P35244 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.66□□□□□ -1.98
RPA3P35244 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.66□□□□□ -1.98
RPA3P35244 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.66□□□□□ -1.98
RPA3P35244 AC090666.1-201ENST00000578241 445 ntBASIC2.66□□□□□ -1.98
RPA3P35244 MIR4635-201ENST00000583759 79 ntBASIC2.66□□□□□ -1.98
RPA3P35244 ELOCP29-201ENST00000588193 334 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.66□□□□□ -1.98
RPA3P35244 KATNBL1P1-201ENST00000605192 748 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AC112503.2-201ENST00000609005 552 ntBASIC2.66□□□□□ -1.98
RPA3P35244 MIR7106-201ENST00000612419 65 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AL355810.1-201ENST00000614629 552 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AC073968.1-201ENST00000618594 637 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AC068722.2-201ENST00000618734 544 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AL360181.4-201ENST00000621752 134 ntBASIC2.66□□□□□ -1.98
RPA3P35244 AC098679.5-201ENST00000624394 571 ntBASIC2.66□□□□□ -1.98
RPA3P35244 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.66□□□□□ -1.98
RPA3P35244 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.66□□□□□ -1.98
RPA3P35244 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.66□□□□□ -1.98
RPA3P35244 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RPA3P35244 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
RPA3P35244 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
RPA3P35244 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RPA3P35244 AC111188.2-201ENST00000529697 1387 ntBASIC2.65□□□□□ -1.98
RPA3P35244 RNU6-730P-201ENST00000383954 104 ntBASIC2.65□□□□□ -1.99
RPA3P35244 MIR649-201ENST00000384843 97 ntBASIC2.65□□□□□ -1.99
RPA3P35244 MIR525-201ENST00000384978 85 ntBASIC2.65□□□□□ -1.99
RPA3P35244 RNU6-821P-201ENST00000390995 107 ntBASIC2.65□□□□□ -1.99
RPA3P35244 RNU6-77P-201ENST00000410554 91 ntBASIC2.65□□□□□ -1.99
RPA3P35244 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.65□□□□□ -1.99
RPA3P35244 UBE2V1P6-201ENST00000430840 422 ntBASIC2.65□□□□□ -1.99
RPA3P35244 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.65□□□□□ -1.99
RPA3P35244 SNRPEP4-201ENST00000435815 279 ntBASIC2.65□□□□□ -1.99
RPA3P35244 AL831737.1-201ENST00000441288 271 ntBASIC2.65□□□□□ -1.99
RPA3P35244 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.65□□□□□ -1.99
RPA3P35244 AC104472.2-201ENST00000469035 601 ntBASIC2.65□□□□□ -1.99
RPA3P35244 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.65□□□□□ -1.99
RPA3P35244 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.65□□□□□ -1.99
RPA3P35244 AC100870.1-201ENST00000522035 505 ntBASIC2.65□□□□□ -1.99
RPA3P35244 COX6CP8-201ENST00000522620 226 ntBASIC2.65□□□□□ -1.99
RPA3P35244 ERHP1-201ENST00000523006 310 ntBASIC2.65□□□□□ -1.99
RPA3P35244 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.65□□□□□ -1.99
RPA3P35244 SNRPGP16-201ENST00000533275 226 ntBASIC2.65□□□□□ -1.99
RPA3P35244 OR8K4P-201ENST00000534608 872 ntBASIC2.65□□□□□ -1.99
RPA3P35244 EIF4BP1-201ENST00000554881 351 ntBASIC2.65□□□□□ -1.99
RPA3P35244 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
RPA3P35244 AC074051.3-201ENST00000570238 358 ntBASIC2.65□□□□□ -1.99
RPA3P35244 AC138761.3-201ENST00000579993 334 ntBASIC2.65□□□□□ -1.99
RPA3P35244 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.65□□□□□ -1.99
RPA3P35244 AL355812.1-201ENST00000603215 216 ntBASIC2.65□□□□□ -1.99
RPA3P35244 AL450270.1-201ENST00000606160 391 ntBASIC2.65□□□□□ -1.99
RPA3P35244 AC006329.2-201ENST00000611491 394 ntBASIC2.65□□□□□ -1.99
RPA3P35244 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
RPA3P35244 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.65□□□□□ -1.99
RPA3P35244 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.65□□□□□ -1.99
RPA3P35244 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RPA3P35244 SGO1P2-201ENST00000429458 1589 ntBASIC2.65□□□□□ -1.99
RPA3P35244 API5P2-201ENST00000397055 1498 ntBASIC2.65□□□□□ -1.99
RPA3P35244 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RPA3P35244 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.64□□□□□ -1.99
RPA3P35244 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RPA3P35244 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
RPA3P35244 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
RPA3P35244 MIR6073-201ENST00000352083 89 ntBASIC2.64□□□□□ -1.99
RPA3P35244 NDUFB4P4-201ENST00000404822 243 ntBASIC2.64□□□□□ -1.99
RPA3P35244 RNA5SP38-201ENST00000410750 119 ntBASIC2.64□□□□□ -1.99
RPA3P35244 RNA5SP21-201ENST00000410917 96 ntBASIC2.64□□□□□ -1.99
RPA3P35244 OR4K6P-201ENST00000416478 897 ntBASIC2.64□□□□□ -1.99
RPA3P35244 SSXP9-201ENST00000417503 292 ntBASIC2.64□□□□□ -1.99
RPA3P35244 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.64□□□□□ -1.99
RPA3P35244 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.64□□□□□ -1.99
RPA3P35244 AC000041.1-201ENST00000439655 175 ntBASIC2.64□□□□□ -1.99
RPA3P35244 AL645638.1-201ENST00000440519 361 ntBASIC2.64□□□□□ -1.99
RPA3P35244 AL691517.1-201ENST00000440833 1235 ntBASIC2.64□□□□□ -1.99
RPA3P35244 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.64□□□□□ -1.99
RPA3P35244 HMGN3P1-201ENST00000453847 193 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms