Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 NEAT1-202ENST00000501122 22743 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TM4SF1P30408 AP002907.1-201ENST00000606361 1430 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TM4SF1P30408 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TM4SF1P30408 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TM4SF1P30408 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.09□□□□□ -1.76
TM4SF1P30408 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
TM4SF1P30408 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.09□□□□□ -1.76
TM4SF1P30408 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.09□□□□□ -1.76
TM4SF1P30408 LINC01355-201ENST00000566551 5444 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TM4SF1P30408 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TM4SF1P30408 XIAPP3-201ENST00000312918 795 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TM4SF1P30408 MIR449A-201ENST00000362113 91 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 RNA5SP189-201ENST00000364920 115 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 RNA5SP235-201ENST00000365411 114 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
TM4SF1P30408 RNU6-1181P-201ENST00000384191 106 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TM4SF1P30408 RN7SKP284-201ENST00000411002 343 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 RPL7P53-201ENST00000421245 739 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 RPS6P12-201ENST00000432491 726 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.08□□□□□ -1.76
TM4SF1P30408 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.08□□□□□ -1.76
TM4SF1P30408 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.08□□□□□ -1.76
TM4SF1P30408 AC097493.1-201ENST00000463958 372 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AP000873.1-201ENST00000463987 400 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 RPS27AP1-201ENST00000475545 471 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TM4SF1P30408 AC078817.1-201ENST00000492623 435 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC090453.1-201ENST00000495560 436 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC078918.1-201ENST00000498515 228 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC006390.1-201ENST00000508068 283 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC093281.2-201ENST00000510153 597 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
TM4SF1P30408 RNA5SP216-201ENST00000516111 123 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC104986.1-201ENST00000517978 436 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC022861.1-201ENST00000522981 663 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.08□□□□□ -1.76
TM4SF1P30408 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TM4SF1P30408 AC022882.1-201ENST00000532142 501 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AP004242.1-201ENST00000533701 349 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.08□□□□□ -1.76
TM4SF1P30408 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.08□□□□□ -1.76
TM4SF1P30408 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.08□□□□□ -1.76
TM4SF1P30408 EEF1B2P4-201ENST00000551398 348 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.08□□□□□ -1.76
TM4SF1P30408 DUXAP1-201ENST00000556632 463 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC012182.1-201ENST00000570133 895 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TM4SF1P30408 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.08□□□□□ -1.76
TM4SF1P30408 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.08□□□□□ -1.76
TM4SF1P30408 AC010928.3-201ENST00000587712 541 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.08□□□□□ -1.76
TM4SF1P30408 SNRPGP15-201ENST00000600149 222 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC128687.1-201ENST00000605304 619 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC055876.5-201ENST00000605667 259 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC107952.2-201ENST00000606048 486 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.08□□□□□ -1.76
TM4SF1P30408 AC092106.3-201ENST00000611308 722 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC110801.1-201ENST00000623590 212 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 AC040168.1-201ENST00000623594 991 ntBASIC4.08□□□□□ -1.76
TM4SF1P30408 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TM4SF1P30408 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
TM4SF1P30408 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TM4SF1P30408 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.07□□□□□ -1.76
TM4SF1P30408 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.07□□□□□ -1.76
TM4SF1P30408 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TM4SF1P30408 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TM4SF1P30408 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TM4SF1P30408 AL157700.1-201ENST00000561973 1432 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TM4SF1P30408 RNU6-989P-201ENST00000362756 107 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 SNORA7.2-201ENST00000364446 145 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 AC010099.3-201ENST00000423896 409 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 BX890604.2-201ENST00000427883 474 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.07□□□□□ -1.76
TM4SF1P30408 MTCYBP34-201ENST00000439552 670 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.07□□□□□ -1.76
TM4SF1P30408 HSPE1P28-201ENST00000443139 211 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.07□□□□□ -1.76
TM4SF1P30408 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.07□□□□□ -1.76
TM4SF1P30408 TRGVB-201ENST00000453257 471 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 USP9YP10-201ENST00000454868 628 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 snoU109.4-201ENST00000458953 143 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.07□□□□□ -1.76
TM4SF1P30408 USP9YP5-201ENST00000511770 630 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 AC105185.1-201ENST00000518705 535 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.07□□□□□ -1.76
TM4SF1P30408 OR4P1P-201ENST00000530808 1136 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 PDCL2P2-201ENST00000533651 189 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TM4SF1P30408 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.07□□□□□ -1.76
TM4SF1P30408 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.07□□□□□ -1.76
TM4SF1P30408 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.07□□□□□ -1.76
TM4SF1P30408 AC010738.1-201ENST00000604970 987 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 AC087683.2-201ENST00000611384 326 ntBASIC4.07□□□□□ -1.76
TM4SF1P30408 AC025588.4-201ENST00000615802 908 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms