Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC008850.1-201ENST00000427546 362 ntBASIC4.36□□□□□ -1.71
CD40P25942 COX6CP13-201ENST00000428703 226 ntBASIC4.36□□□□□ -1.71
CD40P25942 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.36□□□□□ -1.71
CD40P25942 MRPL50P4-201ENST00000446432 475 ntBASIC4.36□□□□□ -1.71
CD40P25942 FABP5P13-201ENST00000452144 328 ntBASIC4.36□□□□□ -1.71
CD40P25942 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.36□□□□□ -1.71
CD40P25942 RPL23AP11-201ENST00000475260 469 ntBASIC4.36□□□□□ -1.71
CD40P25942 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.36□□□□□ -1.71
CD40P25942 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.36□□□□□ -1.71
CD40P25942 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CD40P25942 RBBP4P6-201ENST00000508098 202 ntBASIC4.36□□□□□ -1.71
CD40P25942 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.36□□□□□ -1.71
CD40P25942 Y_RNA.665-201ENST00000516177 98 ntBASIC4.36□□□□□ -1.71
CD40P25942 RNU6-1038P-201ENST00000516516 104 ntBASIC4.36□□□□□ -1.71
CD40P25942 SNORA31.22-201ENST00000517204 135 ntBASIC4.36□□□□□ -1.71
CD40P25942 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.36□□□□□ -1.71
CD40P25942 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.36□□□□□ -1.71
CD40P25942 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.36□□□□□ -1.71
CD40P25942 MIR4795-201ENST00000584182 89 ntBASIC4.36□□□□□ -1.71
CD40P25942 MIR4424-201ENST00000585257 86 ntBASIC4.36□□□□□ -1.71
CD40P25942 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.36□□□□□ -1.71
CD40P25942 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.36□□□□□ -1.71
CD40P25942 AC243960.4-201ENST00000600532 288 ntBASIC4.36□□□□□ -1.71
CD40P25942 FAM25E-202ENST00000608562 189 ntBASIC4.36□□□□□ -1.71
CD40P25942 AL390240.1-201ENST00000612950 384 ntBASIC4.36□□□□□ -1.71
CD40P25942 SDR42E1P2-201ENST00000614861 481 ntBASIC4.36□□□□□ -1.71
CD40P25942 AC100827.5-201ENST00000615883 426 ntBASIC4.36□□□□□ -1.71
CD40P25942 uc_338.34-201ENST00000617467 174 ntBASIC4.36□□□□□ -1.71
CD40P25942 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.36□□□□□ -1.71
CD40P25942 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.36□□□□□ -1.71
CD40P25942 MIR4275-201ENST00000636486 87 ntBASIC4.36□□□□□ -1.71
CD40P25942 AL450345.1-202ENST00000605741 3881 ntBASIC4.36□□□□□ -1.71
CD40P25942 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD40P25942 SAMMSON-226ENST00000642089 1582 ntBASIC4.36□□□□□ -1.71
CD40P25942 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD40P25942 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD40P25942 AC139769.1-204ENST00000472297 1931 ntBASIC4.35□□□□□ -1.71
CD40P25942 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD40P25942 AL022322.2-201ENST00000624072 20397 ntBASIC4.35□□□□□ -1.71
CD40P25942 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
CD40P25942 AC090337.1-201ENST00000579651 2074 ntBASIC4.35□□□□□ -1.71
CD40P25942 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CD40P25942 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD40P25942 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD40P25942 Y_RNA.373-201ENST00000365600 103 ntBASIC4.35□□□□□ -1.71
CD40P25942 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CD40P25942 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD40P25942 AL122016.1-201ENST00000403365 367 ntBASIC4.35□□□□□ -1.71
CD40P25942 AL035079.1-201ENST00000405210 287 ntBASIC4.35□□□□□ -1.71
CD40P25942 SNORA77-201ENST00000408716 125 ntBASIC4.35□□□□□ -1.71
CD40P25942 RPL7P46-201ENST00000425129 740 ntBASIC4.35□□□□□ -1.71
CD40P25942 RPL7L1P10-201ENST00000427790 463 ntBASIC4.35□□□□□ -1.71
CD40P25942 AC024082.2-201ENST00000434771 238 ntBASIC4.35□□□□□ -1.71
CD40P25942 IFNA20P-201ENST00000436840 528 ntBASIC4.35□□□□□ -1.71
CD40P25942 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.35□□□□□ -1.71
CD40P25942 AC112498.1-201ENST00000444401 332 ntBASIC4.35□□□□□ -1.71
CD40P25942 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD40P25942 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.35□□□□□ -1.71
CD40P25942 AC091885.1-201ENST00000506658 268 ntBASIC4.35□□□□□ -1.71
CD40P25942 AC103851.1-201ENST00000506833 274 ntBASIC4.35□□□□□ -1.71
CD40P25942 TTC39CP1-201ENST00000512513 755 ntBASIC4.35□□□□□ -1.71
CD40P25942 AC098976.1-201ENST00000513014 541 ntBASIC4.35□□□□□ -1.71
CD40P25942 RNU4-49P-201ENST00000516080 140 ntBASIC4.35□□□□□ -1.71
CD40P25942 RPL7P20-201ENST00000520308 745 ntBASIC4.35□□□□□ -1.71
CD40P25942 MTND4P7-201ENST00000523876 130 ntBASIC4.35□□□□□ -1.71
CD40P25942 AC021006.3-201ENST00000530771 192 ntBASIC4.35□□□□□ -1.71
CD40P25942 AC109635.4-202ENST00000531666 412 ntBASIC4.35□□□□□ -1.71
CD40P25942 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.35□□□□□ -1.71
CD40P25942 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.35□□□□□ -1.71
CD40P25942 SCOCP1-201ENST00000554676 349 ntBASIC4.35□□□□□ -1.71
CD40P25942 PSMA3P-201ENST00000555485 635 ntBASIC4.35□□□□□ -1.71
CD40P25942 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.35□□□□□ -1.71
CD40P25942 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.35□□□□□ -1.71
CD40P25942 AC022884.2-201ENST00000578535 580 ntBASIC4.35□□□□□ -1.71
CD40P25942 MIR4480-201ENST00000582492 71 ntBASIC4.35□□□□□ -1.71
CD40P25942 AC006116.10-201ENST00000591836 581 ntBASIC4.35□□□□□ -1.71
CD40P25942 AC087783.2-201ENST00000605070 562 ntBASIC4.35□□□□□ -1.71
CD40P25942 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.35□□□□□ -1.71
CD40P25942 AC010133.1-201ENST00000615809 842 ntBASIC4.35□□□□□ -1.71
CD40P25942 AC087385.3-201ENST00000620477 187 ntBASIC4.35□□□□□ -1.71
CD40P25942 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.35□□□□□ -1.71
CD40P25942 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.35□□□□□ -1.71
CD40P25942 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.35□□□□□ -1.71
CD40P25942 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CD40P25942 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
CD40P25942 AL157700.1-201ENST00000561973 1432 ntBASIC4.35□□□□□ -1.71
CD40P25942 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD40P25942 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.35□□□□□ -1.71
CD40P25942 AP004289.2-201ENST00000444413 1457 ntBASIC4.35□□□□□ -1.71
CD40P25942 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD40P25942 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD40P25942 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CD40P25942 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD40P25942 AL356489.2-201ENST00000566968 3528 ntBASIC4.34□□□□□ -1.71
CD40P25942 IRF5P1-201ENST00000504852 2164 ntBASIC4.34□□□□□ -1.71
CD40P25942 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.34□□□□□ -1.71
CD40P25942 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD40P25942 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD40P25942 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CD40P25942 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms