Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
VAMP1P23763 AC092681.1-201ENST00000297369 291 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 Y_RNA.431-201ENST00000384086 102 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 RNU1-136P-201ENST00000384181 164 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 Y_RNA.509-201ENST00000384506 99 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 U3.42-201ENST00000408746 214 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 RPL37P10-201ENST00000412884 288 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 RPL7AP51-201ENST00000422016 760 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.85□□□□□ -1.63
VAMP1P23763 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.85□□□□□ -1.63
VAMP1P23763 GAPDHP58-201ENST00000438477 1006 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 RPL7AP61-201ENST00000443410 636 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.85□□□□□ -1.63
VAMP1P23763 RPL31P15-201ENST00000449770 338 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 AC004129.2-201ENST00000457229 287 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.85□□□□□ -1.63
VAMP1P23763 RNA5SP310-201ENST00000459084 116 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 RPL9P32-201ENST00000464118 620 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 NDUFA5P12-201ENST00000503796 343 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.85□□□□□ -1.63
VAMP1P23763 RNU6-1069P-201ENST00000516612 133 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 RNU6-1282P-201ENST00000516735 96 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 CYCSP25-201ENST00000525280 316 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 AC027369.5-201ENST00000533838 755 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.85□□□□□ -1.63
VAMP1P23763 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.85□□□□□ -1.63
VAMP1P23763 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.85□□□□□ -1.63
VAMP1P23763 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.85□□□□□ -1.63
VAMP1P23763 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.85□□□□□ -1.63
VAMP1P23763 MIR6811-201ENST00000620409 58 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 AL121985.3-201ENST00000620690 523 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.85□□□□□ -1.63
VAMP1P23763 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VAMP1P23763 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
VAMP1P23763 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
VAMP1P23763 ZNF710-AS1-202ENST00000620791 2133 ntBASIC4.85□□□□□ -1.63
VAMP1P23763 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VAMP1P23763 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VAMP1P23763 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.85□□□□□ -1.63
VAMP1P23763 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAMP1P23763 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAMP1P23763 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VAMP1P23763 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
VAMP1P23763 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VAMP1P23763 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
VAMP1P23763 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.84□□□□□ -1.63
VAMP1P23763 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.84□□□□□ -1.63
VAMP1P23763 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.84□□□□□ -1.63
VAMP1P23763 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VAMP1P23763 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAMP1P23763 RNU6-562P-201ENST00000362731 107 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAMP1P23763 RNU6-1011P-201ENST00000384668 107 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 RNU6-1106P-201ENST00000390845 107 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 AC026310.1-201ENST00000396004 378 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 AL353133.1-201ENST00000407695 401 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 RNA5SP155-201ENST00000411154 129 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.84□□□□□ -1.63
VAMP1P23763 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP1P23763 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP1P23763 EEF1B2P3-201ENST00000447718 678 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 AC097359.1-201ENST00000447946 463 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP1P23763 ANP32BP2-201ENST00000454525 545 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 HMGN2P16-201ENST00000456802 261 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 RNU7-138P-201ENST00000459479 64 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 MTND4P17-201ENST00000470444 350 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 RPL7P43-201ENST00000478876 753 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP1P23763 RPS27P27-201ENST00000498779 255 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 HMGN1P13-201ENST00000505795 138 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 RN7SKP24-201ENST00000515888 284 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 RNU6-559P-201ENST00000516151 98 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 RNA5SP454-201ENST00000517231 127 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 IGKV1D-32-201ENST00000517449 318 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP1P23763 TRAV37-201ENST00000553906 342 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 MIR3672-201ENST00000584290 82 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP1P23763 RNU6-85P-201ENST00000605989 107 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 AL118522.2-201ENST00000616045 615 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 AC096861.1-201ENST00000616652 240 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.84□□□□□ -1.63
VAMP1P23763 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.84□□□□□ -1.63
VAMP1P23763 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VAMP1P23763 AC008079.2-201ENST00000623543 20396 ntBASIC4.84□□□□□ -1.63
VAMP1P23763 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.84□□□□□ -1.63
VAMP1P23763 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.84□□□□□ -1.63
VAMP1P23763 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.84□□□□□ -1.63
VAMP1P23763 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VAMP1P23763 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VAMP1P23763 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
VAMP1P23763 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VAMP1P23763 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP1P23763 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VAMP1P23763 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
VAMP1P23763 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms