Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CD44P16070 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CD44P16070 RNA5SP382-201ENST00000363355 112 ntBASIC7.19□□□□□ -1.26
CD44P16070 SNORD115-32-201ENST00000364079 82 ntBASIC7.19□□□□□ -1.26
CD44P16070 RNA5SP355-201ENST00000365317 135 ntBASIC7.19□□□□□ -1.26
CD44P16070 RNU6-756P-201ENST00000383997 107 ntBASIC7.19□□□□□ -1.26
CD44P16070 U3.43-201ENST00000410734 213 ntBASIC7.19□□□□□ -1.26
CD44P16070 RNU6-1001P-201ENST00000411265 100 ntBASIC7.19□□□□□ -1.26
CD44P16070 AL929472.1-201ENST00000417484 429 ntBASIC7.19□□□□□ -1.26
CD44P16070 AC126120.1-201ENST00000431082 470 ntBASIC7.19□□□□□ -1.26
CD44P16070 RPS27P1-201ENST00000450552 247 ntBASIC7.19□□□□□ -1.26
CD44P16070 SNX18P26-201ENST00000458433 740 ntBASIC7.19□□□□□ -1.26
CD44P16070 U8.19-201ENST00000459095 133 ntBASIC7.19□□□□□ -1.26
CD44P16070 AC139453.2-201ENST00000487255 133 ntBASIC7.19□□□□□ -1.26
CD44P16070 RNU6-27P-201ENST00000516146 107 ntBASIC7.19□□□□□ -1.26
CD44P16070 RNA5SP318-201ENST00000516352 92 ntBASIC7.19□□□□□ -1.26
CD44P16070 RNU6-1007P-201ENST00000516586 107 ntBASIC7.19□□□□□ -1.26
CD44P16070 RN7SKP258-201ENST00000517151 304 ntBASIC7.19□□□□□ -1.26
CD44P16070 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.19□□□□□ -1.26
CD44P16070 AP003730.1-201ENST00000524605 285 ntBASIC7.19□□□□□ -1.26
CD44P16070 AP005639.1-201ENST00000526939 192 ntBASIC7.19□□□□□ -1.26
CD44P16070 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.19□□□□□ -1.26
CD44P16070 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC7.19□□□□□ -1.26
CD44P16070 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC7.19□□□□□ -1.26
CD44P16070 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.19□□□□□ -1.26
CD44P16070 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.19□□□□□ -1.26
CD44P16070 RPL29P33-201ENST00000587474 316 ntBASIC7.19□□□□□ -1.26
CD44P16070 AC119403.2-201ENST00000590960 598 ntBASIC7.19□□□□□ -1.26
CD44P16070 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC7.19□□□□□ -1.26
CD44P16070 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC7.19□□□□□ -1.26
CD44P16070 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.19□□□□□ -1.26
CD44P16070 AC005296.1-201ENST00000616145 209 ntBASIC7.19□□□□□ -1.26
CD44P16070 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.19□□□□□ -1.26
CD44P16070 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CD44P16070 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CD44P16070 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CD44P16070 AC107021.2-201ENST00000567714 2095 ntBASIC7.18□□□□□ -1.26
CD44P16070 AC105235.1-201ENST00000623208 1816 ntBASIC7.18□□□□□ -1.26
CD44P16070 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
CD44P16070 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CD44P16070 U3.52-201ENST00000384034 216 ntBASIC7.18□□□□□ -1.26
CD44P16070 RNU6-1124P-201ENST00000384169 107 ntBASIC7.18□□□□□ -1.26
CD44P16070 SNORD51-201ENST00000384320 80 ntBASIC7.18□□□□□ -1.26
CD44P16070 MIR138-2-201ENST00000384916 84 ntBASIC7.18□□□□□ -1.26
CD44P16070 MIR32-201ENST00000384965 70 ntBASIC7.18□□□□□ -1.26
CD44P16070 MIR626-201ENST00000385032 94 ntBASIC7.18□□□□□ -1.26
CD44P16070 RNU6-763P-201ENST00000390865 106 ntBASIC7.18□□□□□ -1.26
CD44P16070 RNU6-788P-201ENST00000390967 104 ntBASIC7.18□□□□□ -1.26
CD44P16070 MRPS21P5-201ENST00000417885 231 ntBASIC7.18□□□□□ -1.26
CD44P16070 AC007568.1-201ENST00000422912 471 ntBASIC7.18□□□□□ -1.26
CD44P16070 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.18□□□□□ -1.26
CD44P16070 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC7.18□□□□□ -1.26
CD44P16070 Y_RNA.649-201ENST00000459077 103 ntBASIC7.18□□□□□ -1.26
CD44P16070 RN7SL165P-201ENST00000477476 291 ntBASIC7.18□□□□□ -1.26
CD44P16070 RPL23AP75-201ENST00000491601 451 ntBASIC7.18□□□□□ -1.26
CD44P16070 SCARNA8-201ENST00000515924 131 ntBASIC7.18□□□□□ -1.26
CD44P16070 AC130366.1-201ENST00000526505 1192 ntBASIC7.18□□□□□ -1.26
CD44P16070 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC7.18□□□□□ -1.26
CD44P16070 TRAV37-201ENST00000553906 342 ntBASIC7.18□□□□□ -1.26
CD44P16070 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.18□□□□□ -1.26
CD44P16070 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC7.18□□□□□ -1.26
CD44P16070 AL034408.1-202ENST00000636088 415 ntBASIC7.18□□□□□ -1.26
CD44P16070 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CD44P16070 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.18□□□□□ -1.26
CD44P16070 AC011455.2-201ENST00000599320 3336 ntBASIC7.18□□□□□ -1.26
CD44P16070 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.18□□□□□ -1.26
CD44P16070 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CD44P16070 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CD44P16070 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CD44P16070 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CD44P16070 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CD44P16070 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC7.18□□□□□ -1.26
CD44P16070 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.18□□□□□ -1.26
CD44P16070 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CD44P16070 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.18□□□□□ -1.26
CD44P16070 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.17□□□□□ -1.26
CD44P16070 AL117339.4-201ENST00000608335 7063 ntBASIC7.17□□□□□ -1.26
CD44P16070 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CD44P16070 AP002833.3-201ENST00000625075 2265 ntBASIC7.17□□□□□ -1.26
CD44P16070 BIN2P1-201ENST00000504996 1530 ntBASIC7.17□□□□□ -1.26
CD44P16070 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 RNA5SP140-201ENST00000364524 92 ntBASIC7.17□□□□□ -1.26
CD44P16070 SNORA51.10-201ENST00000384418 136 ntBASIC7.17□□□□□ -1.26
CD44P16070 Y_RNA.521-201ENST00000384560 114 ntBASIC7.17□□□□□ -1.26
CD44P16070 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CD44P16070 AL139100.1-201ENST00000408001 498 ntBASIC7.17□□□□□ -1.26
CD44P16070 AC099677.1-201ENST00000420575 175 ntBASIC7.17□□□□□ -1.26
CD44P16070 PPP1R11P2-201ENST00000423543 382 ntBASIC7.17□□□□□ -1.26
CD44P16070 AC002553.3-201ENST00000453002 341 ntBASIC7.17□□□□□ -1.26
CD44P16070 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms