Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AP001506.1-201ENST00000615444 211 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AL359880.1-201ENST00000621879 266 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC231657.1-201ENST00000624313 397 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A2P13942 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 AC093535.2-201ENST00000624769 2326 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A2P13942 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A2P13942 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL11A2P13942 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 RNA5SP197-201ENST00000363357 119 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 RNU6-1103P-201ENST00000384150 107 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL11A2P13942 SNORA48.5-201ENST00000391143 135 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 MTCO3P40-201ENST00000392516 676 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AL031121.1-201ENST00000406553 254 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 RNA5SP146-201ENST00000410743 123 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.49□□□□□ -1.69
COL11A2P13942 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 RPS27AP14-201ENST00000422868 454 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 MTCO1P20-201ENST00000425366 358 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A2P13942 AL513175.1-201ENST00000431492 780 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A2P13942 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 RPL18AP17-201ENST00000455326 198 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A2P13942 AC010307.1-201ENST00000467206 836 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.49□□□□□ -1.69
COL11A2P13942 AC013828.1-201ENST00000481845 158 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A2P13942 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A2P13942 PHBP14-201ENST00000512887 367 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 MTCYBP43-201ENST00000513621 740 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 OR5AP1P-201ENST00000529730 940 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AL157687.1-201ENST00000554853 619 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.49□□□□□ -1.69
COL11A2P13942 MIR5697-201ENST00000578045 78 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.49□□□□□ -1.69
COL11A2P13942 AC068790.5-201ENST00000602741 355 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC233280.2-201ENST00000603917 1070 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.49□□□□□ -1.69
COL11A2P13942 AC120349.2-201ENST00000625002 298 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.49□□□□□ -1.69
COL11A2P13942 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 UBE3AP2-201ENST00000429033 2259 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A2P13942 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A2P13942 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A2P13942 AC006026.1-201ENST00000444025 1803 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 AC010300.1-201ENST00000600671 5134 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 AC107982.1-201ENST00000507171 1300 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL11A2P13942 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL11A2P13942 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A2P13942 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL11A2P13942 RNU5F-6P-201ENST00000362979 116 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 RNU6-534P-201ENST00000364877 106 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 Y_RNA.450-201ENST00000384198 113 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 RNA5SP424-201ENST00000390988 115 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 RPS24P12-201ENST00000402084 394 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 HMGB3P20-201ENST00000417997 600 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.48□□□□□ -1.69
COL11A2P13942 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.48□□□□□ -1.69
COL11A2P13942 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.48□□□□□ -1.69
COL11A2P13942 AL451074.3-201ENST00000437709 472 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 MTND5P14-201ENST00000441481 1267 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 MTND1P18-201ENST00000448191 573 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 RPL26P28-201ENST00000451325 435 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.48□□□□□ -1.69
COL11A2P13942 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.48□□□□□ -1.69
COL11A2P13942 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.48□□□□□ -1.69
COL11A2P13942 AF235103.2-201ENST00000525753 346 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.48□□□□□ -1.69
COL11A2P13942 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.48□□□□□ -1.69
COL11A2P13942 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.48□□□□□ -1.69
COL11A2P13942 AC090877.1-201ENST00000561418 344 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 AC136618.2-201ENST00000575091 400 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.48□□□□□ -1.69
COL11A2P13942 AL590282.1-201ENST00000610379 1136 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL11A2P13942 U4.6-201ENST00000621618 127 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 AC116563.2-201ENST00000624751 535 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 FER-210ENST00000628534 558 ntTSL 5 BASIC4.48□□□□□ -1.69
COL11A2P13942 AL133383.2-201ENST00000622958 2336 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 MAPK10-303ENST00000641324 3959 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
COL11A2P13942 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.48□□□□□ -1.69
COL11A2P13942 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms