Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.43□□□□□ -2.02
COL11A1P12107 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.43□□□□□ -2.02
COL11A1P12107 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.43□□□□□ -2.02
COL11A1P12107 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
COL11A1P12107 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.43□□□□□ -2.02
COL11A1P12107 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL11A1P12107 AC004486.1-201ENST00000546846 233 ntBASIC2.43□□□□□ -2.02
COL11A1P12107 AP000942.3-201ENST00000603702 160 ntBASIC2.43□□□□□ -2.02
COL11A1P12107 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.43□□□□□ -2.02
COL11A1P12107 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.43□□□□□ -2.02
COL11A1P12107 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL11A1P12107 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
COL11A1P12107 AC006378.2-201ENST00000623178 2476 ntBASIC2.43□□□□□ -2.02
COL11A1P12107 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL11A1P12107 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL11A1P12107 Y_RNA.118-201ENST00000363300 101 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 Y_RNA.140-201ENST00000363474 103 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 RNA5SP99-201ENST00000364020 114 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 Y_RNA.226-201ENST00000364337 114 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL11A1P12107 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
COL11A1P12107 RFESDP1-201ENST00000422350 461 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL11A1P12107 AC004866.2-201ENST00000438285 481 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.42□□□□□ -2.02
COL11A1P12107 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.42□□□□□ -2.02
COL11A1P12107 MTCYBP14-201ENST00000457471 715 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL11A1P12107 CCNHP1-201ENST00000513311 678 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.42□□□□□ -2.02
COL11A1P12107 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.42□□□□□ -2.02
COL11A1P12107 AADACP1-206ENST00000561502 1193 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.42□□□□□ -2.02
COL11A1P12107 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.42□□□□□ -2.02
COL11A1P12107 AL451074.6-201ENST00000608512 729 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 AL391597.1-201ENST00000618707 694 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 AL118508.4-201ENST00000624142 1176 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 AC092184.1-201ENST00000625042 715 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.42□□□□□ -2.02
COL11A1P12107 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.42□□□□□ -2.02
COL11A1P12107 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.42□□□□□ -2.02
COL11A1P12107 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.42□□□□□ -2.02
COL11A1P12107 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.42□□□□□ -2.02
COL11A1P12107 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.42□□□□□ -2.02
COL11A1P12107 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.42□□□□□ -2.02
COL11A1P12107 TRAV31-201ENST00000502780 342 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.42□□□□□ -2.02
COL11A1P12107 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
COL11A1P12107 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.42□□□□□ -2.02
COL11A1P12107 AC006270.2-201ENST00000578523 652 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.42□□□□□ -2.02
COL11A1P12107 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL11A1P12107 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL11A1P12107 AC025125.1-201ENST00000624743 1922 ntBASIC2.42□□□□□ -2.02
COL11A1P12107 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL11A1P12107 RNF6P1-201ENST00000444889 1784 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.41□□□□□ -2.02
COL11A1P12107 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.41□□□□□ -2.02
COL11A1P12107 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL11A1P12107 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL11A1P12107 AL118496.1-201ENST00000440201 1812 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL11A1P12107 RNU6-317P-201ENST00000384031 107 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
COL11A1P12107 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.41□□□□□ -2.02
COL11A1P12107 AL138785.1-201ENST00000425821 331 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 CR769767.1-201ENST00000436337 346 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 AC025181.1-201ENST00000477507 416 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 AC072039.1-201ENST00000477611 581 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 OR52A4P-203ENST00000498233 1014 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 AC116337.1-201ENST00000509680 687 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.41□□□□□ -2.02
COL11A1P12107 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.41□□□□□ -2.02
COL11A1P12107 IGHV3-76-201ENST00000522465 295 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
COL11A1P12107 AP001004.1-201ENST00000582468 324 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 VN1R9P-201ENST00000614184 867 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 MTND5P7-201ENST00000413558 1798 ntBASIC2.41□□□□□ -2.02
COL11A1P12107 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.41□□□□□ -2.02
COL11A1P12107 AF127577.6-201ENST00000623352 2191 ntBASIC2.4□□□□□ -2.02
COL11A1P12107 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.02
COL11A1P12107 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.4□□□□□ -2.02
COL11A1P12107 SNORA67.3-201ENST00000384366 140 ntBASIC2.4□□□□□ -2.02
COL11A1P12107 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.4□□□□□ -2.02
COL11A1P12107 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
COL11A1P12107 MTND2P8-201ENST00000450555 1025 ntBASIC2.4□□□□□ -2.02
COL11A1P12107 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.4□□□□□ -2.02
COL11A1P12107 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.4□□□□□ -2.02
COL11A1P12107 AC010265.1-201ENST00000513509 211 ntBASIC2.4□□□□□ -2.02
COL11A1P12107 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.4□□□□□ -2.02
COL11A1P12107 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.4□□□□□ -2.02
COL11A1P12107 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
COL11A1P12107 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.4□□□□□ -2.02
COL11A1P12107 MAGOH2P-202ENST00000584384 429 ntBASIC2.4□□□□□ -2.02
COL11A1P12107 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.4□□□□□ -2.02
COL11A1P12107 AC092650.2-201ENST00000619984 902 ntBASIC2.4□□□□□ -2.02
COL11A1P12107 AC048347.1-201ENST00000624621 427 ntBASIC2.4□□□□□ -2.02
COL11A1P12107 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.4□□□□□ -2.02
COL11A1P12107 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
COL11A1P12107 RNU6-1251P-201ENST00000364502 107 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms