Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.75□□□□□ -1.81
LDLRP01130 RNU2-58P-201ENST00000516403 183 ntBASIC3.75□□□□□ -1.81
LDLRP01130 SNORA70.24-201ENST00000517233 118 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.75□□□□□ -1.81
LDLRP01130 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.75□□□□□ -1.81
LDLRP01130 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.75□□□□□ -1.81
LDLRP01130 CYCSP2-201ENST00000558168 301 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AC012435.1-202ENST00000568772 240 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.75□□□□□ -1.81
LDLRP01130 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.75□□□□□ -1.81
LDLRP01130 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDLRP01130 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.75□□□□□ -1.81
LDLRP01130 AC068944.2-201ENST00000610373 403 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AC012531.5-201ENST00000611375 151 ntBASIC3.75□□□□□ -1.81
LDLRP01130 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDLRP01130 AC015540.1-201ENST00000615828 501 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AL391261.4-201ENST00000616012 481 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AC116165.2-201ENST00000616705 206 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AC099842.1-201ENST00000619919 596 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AC009318.4-201ENST00000620496 486 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AC018816.2-201ENST00000621460 353 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AL354798.1-201ENST00000622505 329 ntBASIC3.75□□□□□ -1.81
LDLRP01130 AC009093.8-201ENST00000641769 292 ntBASIC3.75□□□□□ -1.81
LDLRP01130 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
LDLRP01130 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDLRP01130 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LDLRP01130 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
LDLRP01130 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDLRP01130 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.75□□□□□ -1.81
LDLRP01130 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDLRP01130 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
LDLRP01130 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LDLRP01130 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LDLRP01130 CYCSP45-201ENST00000402289 315 ntBASIC3.74□□□□□ -1.81
LDLRP01130 HLFP1-201ENST00000402375 499 ntBASIC3.74□□□□□ -1.81
LDLRP01130 HSPE1P8-201ENST00000406997 288 ntBASIC3.74□□□□□ -1.81
LDLRP01130 RPL31P2-201ENST00000413849 377 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.74□□□□□ -1.81
LDLRP01130 MTND4LP11-201ENST00000422184 280 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.74□□□□□ -1.81
LDLRP01130 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.74□□□□□ -1.81
LDLRP01130 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LDLRP01130 AL358472.1-201ENST00000431295 329 ntBASIC3.74□□□□□ -1.81
LDLRP01130 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.74□□□□□ -1.81
LDLRP01130 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LDLRP01130 MTND1P4-201ENST00000435196 415 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.74□□□□□ -1.81
LDLRP01130 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.74□□□□□ -1.81
LDLRP01130 AC127537.2-201ENST00000439258 465 ntBASIC3.74□□□□□ -1.81
LDLRP01130 HMGB1P37-201ENST00000439613 609 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AL359893.1-201ENST00000447628 1580 ntBASIC3.74□□□□□ -1.81
LDLRP01130 MTCO3P11-201ENST00000455103 774 ntBASIC3.74□□□□□ -1.81
LDLRP01130 CEACAMP4-201ENST00000457676 421 ntBASIC3.74□□□□□ -1.81
LDLRP01130 ARPC3P2-201ENST00000457786 533 ntBASIC3.74□□□□□ -1.81
LDLRP01130 RNA5SP246-201ENST00000458909 119 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC026410.2-201ENST00000460281 156 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC097493.1-201ENST00000463958 372 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC006499.5-201ENST00000505037 514 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.74□□□□□ -1.81
LDLRP01130 AC010424.1-201ENST00000506336 297 ntBASIC3.74□□□□□ -1.81
LDLRP01130 MTCO3P44-201ENST00000510977 541 ntBASIC3.74□□□□□ -1.81
LDLRP01130 PTGES3P3-201ENST00000511479 482 ntBASIC3.74□□□□□ -1.81
LDLRP01130 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
LDLRP01130 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.74□□□□□ -1.81
LDLRP01130 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
LDLRP01130 RNU6-720P-201ENST00000516363 108 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC026403.1-201ENST00000518938 295 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.74□□□□□ -1.81
LDLRP01130 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.74□□□□□ -1.81
LDLRP01130 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.74□□□□□ -1.81
LDLRP01130 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LDLRP01130 OR8L1P-201ENST00000534005 955 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.74□□□□□ -1.81
LDLRP01130 AC120057.2-201ENST00000571520 271 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.74□□□□□ -1.81
LDLRP01130 VN1R92P-201ENST00000598511 928 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC073648.5-201ENST00000603502 305 ntBASIC3.74□□□□□ -1.81
LDLRP01130 RBM11P1-201ENST00000604951 799 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC018714.1-201ENST00000605028 208 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC110741.2-201ENST00000605278 268 ntBASIC3.74□□□□□ -1.81
LDLRP01130 BRDTP1-201ENST00000605735 677 ntBASIC3.74□□□□□ -1.81
LDLRP01130 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AL158063.1-201ENST00000615349 536 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AC073534.2-201ENST00000620377 381 ntBASIC3.74□□□□□ -1.81
LDLRP01130 AL359740.1-201ENST00000624340 592 ntBASIC3.74□□□□□ -1.81
LDLRP01130 CYP3A51P-201ENST00000633513 256 ntBASIC3.74□□□□□ -1.81
LDLRP01130 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LDLRP01130 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.74□□□□□ -1.81
LDLRP01130 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.74□□□□□ -1.81
LDLRP01130 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LDLRP01130 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LDLRP01130 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LDLRP01130 Y_RNA.560-201ENST00000384689 102 ntBASIC3.73□□□□□ -1.81
LDLRP01130 MIR34B-201ENST00000385076 84 ntBASIC3.73□□□□□ -1.81
LDLRP01130 RPL31P1-201ENST00000398116 372 ntBASIC3.73□□□□□ -1.81
LDLRP01130 DHFRP6-201ENST00000401776 268 ntBASIC3.73□□□□□ -1.81
LDLRP01130 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.73□□□□□ -1.81
LDLRP01130 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.73□□□□□ -1.81
LDLRP01130 AL953862.1-201ENST00000423016 168 ntBASIC3.73□□□□□ -1.81
LDLRP01130 ZYG11AP1-201ENST00000430329 837 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms