Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC092436.1-201ENST00000506450 503 ntBASIC3.38□□□□□ -1.87
BRD4O60885 RNU6-1004P-201ENST00000516584 111 ntBASIC3.38□□□□□ -1.87
BRD4O60885 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.38□□□□□ -1.87
BRD4O60885 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.38□□□□□ -1.87
BRD4O60885 AP001029.3-201ENST00000588063 596 ntBASIC3.38□□□□□ -1.87
BRD4O60885 AC005021.1-201ENST00000608730 355 ntBASIC3.38□□□□□ -1.87
BRD4O60885 AL590282.1-201ENST00000610379 1136 ntBASIC3.38□□□□□ -1.87
BRD4O60885 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.38□□□□□ -1.87
BRD4O60885 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.37□□□□□ -1.87
BRD4O60885 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.37□□□□□ -1.87
BRD4O60885 ATP5F1P6-201ENST00000402768 767 ntBASIC3.37□□□□□ -1.87
BRD4O60885 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.37□□□□□ -1.87
BRD4O60885 ATG3P1-201ENST00000419507 911 ntBASIC3.37□□□□□ -1.87
BRD4O60885 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.37□□□□□ -1.87
BRD4O60885 OR51AB1P-201ENST00000429046 620 ntBASIC3.37□□□□□ -1.87
BRD4O60885 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.37□□□□□ -1.87
BRD4O60885 AL157827.1-201ENST00000447622 132 ntBASIC3.37□□□□□ -1.87
BRD4O60885 AL353705.4-201ENST00000449661 238 ntBASIC3.37□□□□□ -1.87
BRD4O60885 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.37□□□□□ -1.87
BRD4O60885 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
BRD4O60885 RNU6-826P-201ENST00000516827 104 ntBASIC3.37□□□□□ -1.87
BRD4O60885 RNU6-548P-201ENST00000517083 115 ntBASIC3.37□□□□□ -1.87
BRD4O60885 AC004486.1-201ENST00000546846 233 ntBASIC3.37□□□□□ -1.87
BRD4O60885 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.37□□□□□ -1.87
BRD4O60885 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.37□□□□□ -1.87
BRD4O60885 AL627309.6-201ENST00000606857 840 ntBASIC3.37□□□□□ -1.87
BRD4O60885 AC131902.3-201ENST00000611767 581 ntBASIC3.37□□□□□ -1.87
BRD4O60885 AP005212.4-201ENST00000614206 710 ntBASIC3.37□□□□□ -1.87
BRD4O60885 AC068831.7-201ENST00000616954 363 ntBASIC3.37□□□□□ -1.87
BRD4O60885 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BRD4O60885 MIR1291-201ENST00000627649 87 ntBASIC3.37□□□□□ -1.87
BRD4O60885 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
BRD4O60885 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BRD4O60885 SNORA26.7-201ENST00000391288 122 ntBASIC3.36□□□□□ -1.87
BRD4O60885 RNU6-1077P-201ENST00000410506 102 ntBASIC3.36□□□□□ -1.87
BRD4O60885 NANOGP5-201ENST00000424456 877 ntBASIC3.36□□□□□ -1.87
BRD4O60885 HMGN2P3-201ENST00000433603 273 ntBASIC3.36□□□□□ -1.87
BRD4O60885 SNRPEP4-201ENST00000435815 279 ntBASIC3.36□□□□□ -1.87
BRD4O60885 HMGN2P5-201ENST00000436882 273 ntBASIC3.36□□□□□ -1.87
BRD4O60885 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.36□□□□□ -1.87
BRD4O60885 FAM103A2P-201ENST00000444122 354 ntBASIC3.36□□□□□ -1.87
BRD4O60885 HIGD1AP2-201ENST00000446367 280 ntBASIC3.36□□□□□ -1.87
BRD4O60885 HMGB1P26-201ENST00000452520 628 ntBASIC3.36□□□□□ -1.87
BRD4O60885 AC104472.2-201ENST00000469035 601 ntBASIC3.36□□□□□ -1.87
BRD4O60885 RPL23AP45-201ENST00000476406 468 ntBASIC3.36□□□□□ -1.87
BRD4O60885 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.36□□□□□ -1.87
BRD4O60885 ARL4AP2-201ENST00000507378 601 ntBASIC3.36□□□□□ -1.87
BRD4O60885 TBCAP3-201ENST00000512475 312 ntBASIC3.36□□□□□ -1.87
BRD4O60885 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.36□□□□□ -1.87
BRD4O60885 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.36□□□□□ -1.87
BRD4O60885 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
BRD4O60885 AC019227.1-201ENST00000526902 510 ntBASIC3.36□□□□□ -1.87
BRD4O60885 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.36□□□□□ -1.87
BRD4O60885 RPL23AP84-201ENST00000571193 464 ntBASIC3.36□□□□□ -1.87
BRD4O60885 AC060766.3-201ENST00000591442 263 ntBASIC3.36□□□□□ -1.87
BRD4O60885 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.36□□□□□ -1.87
BRD4O60885 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.36□□□□□ -1.87
BRD4O60885 AC010620.2-201ENST00000600135 313 ntBASIC3.36□□□□□ -1.87
BRD4O60885 AP003122.6-201ENST00000623831 495 ntBASIC3.36□□□□□ -1.87
BRD4O60885 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BRD4O60885 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRD4O60885 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRD4O60885 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRD4O60885 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRD4O60885 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRD4O60885 AC006020.1-201ENST00000420179 1854 ntBASIC3.35□□□□□ -1.87
BRD4O60885 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRD4O60885 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
BRD4O60885 MIR6073-201ENST00000352083 89 ntBASIC3.35□□□□□ -1.87
BRD4O60885 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRD4O60885 RNU1-73P-201ENST00000383971 164 ntBASIC3.35□□□□□ -1.87
BRD4O60885 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.35□□□□□ -1.87
BRD4O60885 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.35□□□□□ -1.87
BRD4O60885 RNU4-26P-201ENST00000410270 107 ntBASIC3.35□□□□□ -1.87
BRD4O60885 MTCYBP24-201ENST00000420387 1106 ntBASIC3.35□□□□□ -1.87
BRD4O60885 AC023128.2-201ENST00000420880 1223 ntBASIC3.35□□□□□ -1.87
BRD4O60885 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.35□□□□□ -1.87
BRD4O60885 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BRD4O60885 RNU6-1308P-201ENST00000516817 103 ntBASIC3.35□□□□□ -1.87
BRD4O60885 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.35□□□□□ -1.87
BRD4O60885 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.35□□□□□ -1.87
BRD4O60885 SNORD84-203ENST00000584275 78 ntBASIC3.35□□□□□ -1.87
BRD4O60885 AL590410.1-201ENST00000617925 333 ntBASIC3.35□□□□□ -1.87
BRD4O60885 AC091046.2-201ENST00000620775 665 ntBASIC3.35□□□□□ -1.87
BRD4O60885 AC006249.1-201ENST00000621223 471 ntBASIC3.35□□□□□ -1.87
BRD4O60885 PISRT1-201ENST00000626175 531 ntBASIC3.35□□□□□ -1.87
BRD4O60885 AC123912.3-201ENST00000600907 1367 ntBASIC3.34□□□□□ -1.87
BRD4O60885 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.34□□□□□ -1.87
BRD4O60885 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.34□□□□□ -1.87
BRD4O60885 RPL21P132-201ENST00000331267 462 ntBASIC3.34□□□□□ -1.88
BRD4O60885 Y_RNA.238-201ENST00000364441 102 ntBASIC3.34□□□□□ -1.88
BRD4O60885 RNU6-185P-201ENST00000384421 107 ntBASIC3.34□□□□□ -1.88
BRD4O60885 BTBD10P2-201ENST00000404779 676 ntBASIC3.34□□□□□ -1.88
BRD4O60885 AL591034.1-201ENST00000407447 340 ntBASIC3.34□□□□□ -1.88
BRD4O60885 MTCO2P17-201ENST00000424336 677 ntBASIC3.34□□□□□ -1.88
BRD4O60885 AL035407.2-201ENST00000454090 378 ntBASIC3.34□□□□□ -1.88
BRD4O60885 MTND3P6-201ENST00000485242 339 ntBASIC3.34□□□□□ -1.88
BRD4O60885 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.34□□□□□ -1.88
BRD4O60885 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.34□□□□□ -1.88
BRD4O60885 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms