Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX3O60493 MIR5096-201ENST00000583713 70 ntBASIC3.4□□□□□ -1.87
SNX3O60493 AC067852.3-201ENST00000589177 561 ntBASIC3.4□□□□□ -1.87
SNX3O60493 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX3O60493 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX3O60493 AL445567.2-201ENST00000618935 498 ntBASIC3.4□□□□□ -1.87
SNX3O60493 MIR6500-201ENST00000622700 86 ntBASIC3.4□□□□□ -1.87
SNX3O60493 CRYM-AS1-204ENST00000637983 556 ntBASIC3.4□□□□□ -1.87
SNX3O60493 USP8P1-201ENST00000494673 3183 ntBASIC3.4□□□□□ -1.87
SNX3O60493 AC004925.1-201ENST00000624256 2706 ntBASIC3.4□□□□□ -1.87
SNX3O60493 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
SNX3O60493 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNX3O60493 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
SNX3O60493 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.4□□□□□ -1.87
SNX3O60493 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SNX3O60493 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 AL365440.1-201ENST00000436135 2167 ntBASIC3.39□□□□□ -1.87
SNX3O60493 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SNX3O60493 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SNX3O60493 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
SNX3O60493 U3.6-201ENST00000363622 211 ntBASIC3.39□□□□□ -1.87
SNX3O60493 Y_RNA.234-201ENST00000364409 97 ntBASIC3.39□□□□□ -1.87
SNX3O60493 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.39□□□□□ -1.87
SNX3O60493 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 AL049545.1-201ENST00000401856 572 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AC007899.1-201ENST00000412776 775 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX3O60493 AC099677.1-201ENST00000420575 175 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AC234781.2-201ENST00000426370 994 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX3O60493 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX3O60493 PAXBP1P1-201ENST00000449315 447 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX3O60493 RPS29P33-201ENST00000456717 146 ntBASIC3.39□□□□□ -1.87
SNX3O60493 NDUFA5P9-201ENST00000472609 340 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AC017015.1-201ENST00000477387 286 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AC072039.1-201ENST00000477611 581 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AC093267.1-201ENST00000489176 961 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AC093809.1-201ENST00000509155 340 ntBASIC3.39□□□□□ -1.87
SNX3O60493 RNU2-58P-201ENST00000516403 183 ntBASIC3.39□□□□□ -1.87
SNX3O60493 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX3O60493 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.39□□□□□ -1.87
SNX3O60493 AC018630.1-201ENST00000541376 925 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX3O60493 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.39□□□□□ -1.87
SNX3O60493 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.39□□□□□ -1.87
SNX3O60493 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX3O60493 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX3O60493 AC120057.2-201ENST00000571520 271 ntBASIC3.39□□□□□ -1.87
SNX3O60493 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AL353997.4-201ENST00000586196 166 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX3O60493 DUXAP11-201ENST00000603858 526 ntBASIC3.39□□□□□ -1.87
SNX3O60493 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.39□□□□□ -1.87
SNX3O60493 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 AC010733.2-201ENST00000589496 5702 ntBASIC3.39□□□□□ -1.87
SNX3O60493 AL645937.1-201ENST00000641739 1652 ntBASIC3.39□□□□□ -1.87
SNX3O60493 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SNX3O60493 AC093831.2-201ENST00000624393 3427 ntBASIC3.38□□□□□ -1.87
SNX3O60493 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNX3O60493 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
SNX3O60493 Y_RNA.169-201ENST00000363745 96 ntBASIC3.38□□□□□ -1.87
SNX3O60493 RNU6-744P-201ENST00000365557 107 ntBASIC3.38□□□□□ -1.87
SNX3O60493 RNU6-1074P-201ENST00000383995 104 ntBASIC3.38□□□□□ -1.87
SNX3O60493 RNU6-1181P-201ENST00000384191 106 ntBASIC3.38□□□□□ -1.87
SNX3O60493 RNU6-1316P-201ENST00000384242 108 ntBASIC3.38□□□□□ -1.87
SNX3O60493 SNORD3H-201ENST00000384486 214 ntBASIC3.38□□□□□ -1.87
SNX3O60493 AC007066.1-201ENST00000392902 381 ntBASIC3.38□□□□□ -1.87
SNX3O60493 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX3O60493 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.38□□□□□ -1.87
SNX3O60493 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.38□□□□□ -1.87
SNX3O60493 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.38□□□□□ -1.87
SNX3O60493 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX3O60493 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX3O60493 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX3O60493 UBE2FP3-201ENST00000436366 524 ntBASIC3.38□□□□□ -1.87
SNX3O60493 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX3O60493 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX3O60493 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX3O60493 snoU13.8-201ENST00000458890 104 ntBASIC3.38□□□□□ -1.87
SNX3O60493 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX3O60493 AC104563.1-201ENST00000476147 376 ntBASIC3.38□□□□□ -1.87
SNX3O60493 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX3O60493 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SNX3O60493 AC096751.1-202ENST00000502691 1067 ntBASIC3.38□□□□□ -1.87
SNX3O60493 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.38□□□□□ -1.87
SNX3O60493 AC108064.1-201ENST00000513791 460 ntBASIC3.38□□□□□ -1.87
SNX3O60493 AC034159.1-201ENST00000513885 583 ntBASIC3.38□□□□□ -1.87
SNX3O60493 RNU6-678P-201ENST00000516832 109 ntBASIC3.38□□□□□ -1.87
SNX3O60493 RNU6-714P-201ENST00000516963 103 ntBASIC3.38□□□□□ -1.87
SNX3O60493 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SNX3O60493 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms