Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC005183.1-201ENST00000603687 1979 ntBASIC6.43□□□□□ -1.38
ACTN4O43707 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.43□□□□□ -1.38
ACTN4O43707 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
ACTN4O43707 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN4O43707 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.43□□□□□ -1.38
ACTN4O43707 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN4O43707 AL121839.2-201ENST00000565058 6943 ntBASIC6.43□□□□□ -1.38
ACTN4O43707 AC140134.1-201ENST00000511830 3544 ntBASIC6.43□□□□□ -1.38
ACTN4O43707 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
ACTN4O43707 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
ACTN4O43707 AC083899.1-201ENST00000454465 3819 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
ACTN4O43707 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN4O43707 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.42□□□□□ -1.38
ACTN4O43707 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
ACTN4O43707 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN4O43707 AL159987.1-201ENST00000347911 293 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 RNU6-1117P-201ENST00000384525 104 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.42□□□□□ -1.38
ACTN4O43707 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.42□□□□□ -1.38
ACTN4O43707 AL513124.1-201ENST00000450410 614 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 Y_RNA.667-201ENST00000516212 107 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 RNA5SP438-201ENST00000516561 112 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.42□□□□□ -1.38
ACTN4O43707 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.42□□□□□ -1.38
ACTN4O43707 AC092121.1-201ENST00000569452 202 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 AC012119.1-201ENST00000603184 222 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 SNHG22-203ENST00000617833 660 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 AL161637.1-201ENST00000622380 412 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.42□□□□□ -1.38
ACTN4O43707 AL359893.1-201ENST00000447628 1580 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
ACTN4O43707 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
ACTN4O43707 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
ACTN4O43707 AL137003.2-201ENST00000606924 2538 ntBASIC6.42□□□□□ -1.38
ACTN4O43707 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN4O43707 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN4O43707 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN4O43707 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.41□□□□□ -1.38
ACTN4O43707 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ACTN4O43707 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.41□□□□□ -1.38
ACTN4O43707 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ACTN4O43707 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
ACTN4O43707 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ACTN4O43707 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.41□□□□□ -1.38
ACTN4O43707 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.41□□□□□ -1.38
ACTN4O43707 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ACTN4O43707 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ACTN4O43707 RNU6-1290P-201ENST00000362957 109 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ACTN4O43707 RNU6-1293P-201ENST00000384077 107 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 AC005042.1-201ENST00000393397 800 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 AL080315.1-201ENST00000406055 466 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 RNU2-51P-201ENST00000410708 197 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
ACTN4O43707 BX323845.3-201ENST00000428215 527 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.41□□□□□ -1.38
ACTN4O43707 AC138761.5-201ENST00000433967 325 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.41□□□□□ -1.38
ACTN4O43707 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.41□□□□□ -1.38
ACTN4O43707 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.41□□□□□ -1.38
ACTN4O43707 RPS17P15-201ENST00000475609 349 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 AC009120.1-201ENST00000493458 473 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 RPS23P5-201ENST00000495419 428 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 NDUFB4P9-201ENST00000511646 388 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 AF186190.1-201ENST00000517470 480 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 AC069113.1-201ENST00000517763 267 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 HMGN2P36-201ENST00000529541 409 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.41□□□□□ -1.38
ACTN4O43707 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.41□□□□□ -1.38
ACTN4O43707 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.41□□□□□ -1.38
ACTN4O43707 AC026826.3-201ENST00000561747 158 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.41□□□□□ -1.38
ACTN4O43707 AL160281.1-201ENST00000605307 311 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 AL591926.1-201ENST00000620542 217 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 RNU6-156P-201ENST00000621869 107 ntBASIC6.41□□□□□ -1.38
ACTN4O43707 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.41□□□□□ -1.38
ACTN4O43707 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.41□□□□□ -1.38
ACTN4O43707 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ACTN4O43707 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.41□□□□□ -1.38
ACTN4O43707 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ACTN4O43707 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ACTN4O43707 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.4□□□□□ -1.38
ACTN4O43707 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
ACTN4O43707 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ACTN4O43707 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.4□□□□□ -1.38
ACTN4O43707 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.4□□□□□ -1.38
ACTN4O43707 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ACTN4O43707 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ACTN4O43707 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ACTN4O43707 ZNF285B-201ENST00000561698 1767 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ACTN4O43707 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ACTN4O43707 RNU1-130P-201ENST00000363930 160 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 RNU6-1317P-201ENST00000364582 104 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 RNU6-701P-201ENST00000384059 107 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 RNU6-708P-201ENST00000384217 107 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 RNU6-45P-201ENST00000384471 107 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms