Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC108729.1-201ENST00000487812 947 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC28A1O00337 FCF1P8-201ENST00000510322 597 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AC010587.2-201ENST00000511727 448 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 RNU6-150P-201ENST00000516237 95 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 SNORA64.4-201ENST00000516632 81 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC28A1O00337 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC28A1O00337 UBE2NP1-201ENST00000545592 458 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC28A1O00337 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC28A1O00337 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.25□□□□□ -1.89
SLC28A1O00337 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.25□□□□□ -1.89
SLC28A1O00337 MED28P6-201ENST00000558776 231 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AC037471.2-201ENST00000564941 598 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AC015917.1-201ENST00000579654 510 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 BBIP1P1-201ENST00000602999 279 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AC012443.1-201ENST00000605605 231 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AC097478.2-201ENST00000610572 514 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC28A1O00337 AL357080.1-201ENST00000617394 239 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 XIST_intron.1-201ENST00000619444 68 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AC013470.4-201ENST00000619978 986 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 SNORD39.4-201ENST00000620099 78 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 PLCE1P1-201ENST00000622094 305 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 MIR6810-201ENST00000622701 70 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AC073476.4-201ENST00000628409 72 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
SLC28A1O00337 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC28A1O00337 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SLC28A1O00337 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC28A1O00337 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.25□□□□□ -1.89
SLC28A1O00337 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SLC28A1O00337 AL161912.2-201ENST00000565707 3007 ntBASIC3.25□□□□□ -1.89
SLC28A1O00337 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC28A1O00337 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SLC28A1O00337 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC28A1O00337 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SLC28A1O00337 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC28A1O00337 TAB3P1-202ENST00000452645 1634 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC28A1O00337 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC28A1O00337 SNORA73.2-201ENST00000364946 201 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 SNORA57.1-201ENST00000391227 145 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AL136372.1-201ENST00000403060 228 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 RN7SKP159-201ENST00000410657 292 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC28A1O00337 SSXP9-201ENST00000417503 292 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 ELOCP9-201ENST00000418624 239 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC28A1O00337 AL953862.1-201ENST00000423016 168 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC28A1O00337 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC28A1O00337 COX7BP2-201ENST00000437976 242 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 RAC1P7-201ENST00000445367 377 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC28A1O00337 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC28A1O00337 USP9YP25-201ENST00000457708 443 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 ACTR3P3-201ENST00000480448 893 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AC021146.5-201ENST00000503544 545 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC28A1O00337 AC093677.1-201ENST00000514414 678 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.24□□□□□ -1.89
SLC28A1O00337 RNU1-95P-201ENST00000516357 160 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 RNU1-128P-201ENST00000516704 160 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SLC28A1O00337 AC104027.1-201ENST00000521887 300 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 HIGD1AP10-201ENST00000527837 282 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC28A1O00337 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC28A1O00337 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC28A1O00337 NBEAP1-201ENST00000554452 979 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 BNIP3P5-201ENST00000562290 498 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC28A1O00337 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC28A1O00337 OR4K8P-201ENST00000578842 1048 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AC006386.1-201ENST00000619436 415 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AL356321.1-201ENST00000621360 228 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AL445264.1-201ENST00000621719 171 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 AL136164.4-201ENST00000625013 2135 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC28A1O00337 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC28A1O00337 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC28A1O00337 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC28A1O00337 CR383658.2-201ENST00000547576 1525 ntBASIC3.24□□□□□ -1.89
SLC28A1O00337 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC28A1O00337 AL356274.2-201ENST00000624379 3752 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SLC28A1O00337 RNU6-805P-201ENST00000365643 106 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 MIR135A2-201ENST00000384854 100 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 RNU6-952P-201ENST00000391164 108 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 RNU2-43P-201ENST00000410306 190 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 USP9YP33-201ENST00000412220 421 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 BX890604.2-201ENST00000427883 474 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC28A1O00337 AL035246.1-201ENST00000433554 1255 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 USP9YP35-201ENST00000435696 412 ntBASIC3.23□□□□□ -1.89
SLC28A1O00337 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC28A1O00337 snoU13.8-201ENST00000458890 104 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms