Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.57□□□□□ -2
UPK1AO00322 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.57□□□□□ -2
UPK1AO00322 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.57□□□□□ -2
UPK1AO00322 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.57□□□□□ -2
UPK1AO00322 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.57□□□□□ -2
UPK1AO00322 HSFY3P-201ENST00000444242 1191 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC104073.1-201ENST00000451988 151 ntBASIC2.57□□□□□ -2
UPK1AO00322 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.57□□□□□ -2
UPK1AO00322 RPL21P39-201ENST00000463605 483 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC011979.1-201ENST00000472300 483 ntBASIC2.57□□□□□ -2
UPK1AO00322 HMGN2P13-201ENST00000476476 274 ntBASIC2.57□□□□□ -2
UPK1AO00322 RPL21P93-201ENST00000480465 489 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC233702.1-201ENST00000482905 502 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC087190.1-201ENST00000484462 480 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.57□□□□□ -2
UPK1AO00322 AC093591.1-201ENST00000491435 481 ntBASIC2.57□□□□□ -2
UPK1AO00322 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.57□□□□□ -2
UPK1AO00322 RPL21P16-201ENST00000495531 483 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.57□□□□□ -2
UPK1AO00322 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.57□□□□□ -2
UPK1AO00322 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.57□□□□□ -2
UPK1AO00322 PRELID3BP4-201ENST00000515476 571 ntBASIC2.57□□□□□ -2
UPK1AO00322 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.57□□□□□ -2
UPK1AO00322 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.57□□□□□ -2
UPK1AO00322 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.57□□□□□ -2
UPK1AO00322 MIR3200-201ENST00000580767 85 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.57□□□□□ -2
UPK1AO00322 AL109653.1-201ENST00000603091 248 ntBASIC2.57□□□□□ -2
UPK1AO00322 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.57□□□□□ -2
UPK1AO00322 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.57□□□□□ -2
UPK1AO00322 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.57□□□□□ -2
UPK1AO00322 AL390240.1-201ENST00000612950 384 ntBASIC2.57□□□□□ -2
UPK1AO00322 AL354696.1-201ENST00000614652 497 ntBASIC2.57□□□□□ -2
UPK1AO00322 AP006248.3-201ENST00000623580 594 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
UPK1AO00322 AP001002.2-201ENST00000625137 386 ntBASIC2.57□□□□□ -2
UPK1AO00322 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
UPK1AO00322 MTND2P41-201ENST00000637599 773 ntBASIC2.57□□□□□ -2
UPK1AO00322 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
UPK1AO00322 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.57□□□□□ -2
UPK1AO00322 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.57□□□□□ -2
UPK1AO00322 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
UPK1AO00322 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.57□□□□□ -2
UPK1AO00322 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UPK1AO00322 ZNF807-201ENST00000328088 1707 ntBASIC2.56□□□□□ -2
UPK1AO00322 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.56□□□□□ -2
UPK1AO00322 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.56□□□□□ -2
UPK1AO00322 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.56□□□□□ -2
UPK1AO00322 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.56□□□□□ -2
UPK1AO00322 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.56□□□□□ -2
UPK1AO00322 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.56□□□□□ -2
UPK1AO00322 RNU6-481P-201ENST00000384194 107 ntBASIC2.56□□□□□ -2
UPK1AO00322 RNU6-821P-201ENST00000390995 107 ntBASIC2.56□□□□□ -2
UPK1AO00322 TMSB4XP8-201ENST00000402089 135 ntBASIC2.56□□□□□ -2
UPK1AO00322 MTND4LP20-201ENST00000402379 270 ntBASIC2.56□□□□□ -2
UPK1AO00322 AL023807.1-201ENST00000407932 359 ntBASIC2.56□□□□□ -2
UPK1AO00322 AL592148.1-201ENST00000413568 445 ntBASIC2.56□□□□□ -2
UPK1AO00322 TMSB4XP6-201ENST00000415187 135 ntBASIC2.56□□□□□ -2
UPK1AO00322 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.56□□□□□ -2
UPK1AO00322 FNDC3CP-201ENST00000420795 1155 ntBASIC2.56□□□□□ -2
UPK1AO00322 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.56□□□□□ -2
UPK1AO00322 TMSB4XP1-201ENST00000424567 135 ntBASIC2.56□□□□□ -2
UPK1AO00322 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.56□□□□□ -2
UPK1AO00322 CYCSP32-201ENST00000440548 321 ntBASIC2.56□□□□□ -2
UPK1AO00322 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.56□□□□□ -2
UPK1AO00322 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.56□□□□□ -2
UPK1AO00322 RPL17P49-201ENST00000443728 411 ntBASIC2.56□□□□□ -2
UPK1AO00322 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.56□□□□□ -2
UPK1AO00322 AL096803.2-201ENST00000450032 677 ntBASIC2.56□□□□□ -2
UPK1AO00322 GTF2IP12-201ENST00000456547 356 ntBASIC2.56□□□□□ -2
UPK1AO00322 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.56□□□□□ -2
UPK1AO00322 NAP1L1P3-201ENST00000462291 880 ntBASIC2.56□□□□□ -2
UPK1AO00322 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.56□□□□□ -2
UPK1AO00322 AC008571.1-201ENST00000467232 300 ntBASIC2.56□□□□□ -2
UPK1AO00322 RPS23P3-201ENST00000470993 430 ntBASIC2.56□□□□□ -2
UPK1AO00322 RPS27P27-201ENST00000498779 255 ntBASIC2.56□□□□□ -2
UPK1AO00322 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.56□□□□□ -2
UPK1AO00322 AC112518.2-201ENST00000508565 425 ntBASIC2.56□□□□□ -2
UPK1AO00322 KLHL2P1-201ENST00000508691 521 ntBASIC2.56□□□□□ -2
UPK1AO00322 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.56□□□□□ -2
UPK1AO00322 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.56□□□□□ -2
UPK1AO00322 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.56□□□□□ -2
UPK1AO00322 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.56□□□□□ -2
UPK1AO00322 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.56□□□□□ -2
UPK1AO00322 AC079148.1-201ENST00000565944 819 ntBASIC2.56□□□□□ -2
UPK1AO00322 SNORD84-203ENST00000584275 78 ntBASIC2.56□□□□□ -2
UPK1AO00322 AL451007.1-201ENST00000595491 289 ntBASIC2.56□□□□□ -2
UPK1AO00322 AL356575.1-201ENST00000603008 283 ntBASIC2.56□□□□□ -2
UPK1AO00322 AC096947.1-201ENST00000603233 470 ntBASIC2.56□□□□□ -2
UPK1AO00322 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.56□□□□□ -2
UPK1AO00322 AL445493.3-201ENST00000619568 477 ntBASIC2.56□□□□□ -2
UPK1AO00322 AL590396.4-201ENST00000636779 956 ntBASIC2.56□□□□□ -2
UPK1AO00322 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.56□□□□□ -2
UPK1AO00322 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
UPK1AO00322 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.56□□□□□ -2
UPK1AO00322 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.56□□□□□ -2
UPK1AO00322 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
UPK1AO00322 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.55□□□□□ -2
UPK1AO00322 SNORD65C-201ENST00000390962 71 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms