Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL592221.1-201ENST00000605266 382 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 AC106028.5-201ENST00000610332 395 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 AL590099.1-201ENST00000615276 138 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC188H7C350 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.57□□□□□ -1.84
CCDC188H7C350 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC188H7C350 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC188H7C350 AC103706.2-201ENST00000638080 240 ntBASIC3.57□□□□□ -1.84
CCDC188H7C350 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC188H7C350 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC188H7C350 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC188H7C350 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC188H7C350 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC188H7C350 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
CCDC188H7C350 RNU6-289P-201ENST00000364093 107 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 RNU1-64P-201ENST00000365443 163 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 RNU6-328P-201ENST00000390887 106 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 RNU6-952P-201ENST00000391164 108 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 RN7SKP156-201ENST00000410308 342 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC188H7C350 Z99755.1-201ENST00000414048 380 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 CCDC58P2-201ENST00000417131 366 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC188H7C350 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC188H7C350 AL590103.1-201ENST00000434488 307 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC188H7C350 RAC1P7-201ENST00000445367 377 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 CDC27P1-201ENST00000445384 715 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.56□□□□□ -1.84
CCDC188H7C350 AC017015.1-201ENST00000477387 286 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 UBE2CP3-201ENST00000502715 450 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC188H7C350 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC188H7C350 RN7SKP13-201ENST00000515933 244 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 IGKV2-23-201ENST00000518729 323 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC188H7C350 AC007991.1-201ENST00000522680 631 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC188H7C350 DUXAP1-201ENST00000556632 463 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.56□□□□□ -1.84
CCDC188H7C350 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC188H7C350 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC188H7C350 MIR3186-201ENST00000577404 85 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AC053481.4-201ENST00000583164 216 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC188H7C350 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC188H7C350 AC067852.3-201ENST00000589177 561 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC188H7C350 AL391001.1-201ENST00000602747 715 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AC022022.2-201ENST00000602989 360 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AL357080.1-201ENST00000617394 239 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AL596245.1-201ENST00000618994 362 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 U4.6-201ENST00000621618 127 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AL161637.1-201ENST00000622380 412 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AC092628.2-201ENST00000622492 339 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 AC034229.5-201ENST00000624258 185 ntBASIC3.56□□□□□ -1.84
CCDC188H7C350 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC188H7C350 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC188H7C350 SGO1P2-201ENST00000429458 1589 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC188H7C350 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC188H7C350 RPL7P26-201ENST00000333817 754 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AL161781.1-201ENST00000354277 403 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 SNORD9-201ENST00000362566 104 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 RNU6-97P-201ENST00000363387 104 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC188H7C350 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC188H7C350 RNU6-253P-201ENST00000384730 105 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC188H7C350 RPS3AP26-201ENST00000398259 784 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 THAP5P1-201ENST00000439089 262 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AC122718.1-201ENST00000439448 744 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 MTCYBP34-201ENST00000439552 670 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC188H7C350 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC188H7C350 USP9YP10-201ENST00000454868 628 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC188H7C350 FAM133DP-201ENST00000464802 691 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC188H7C350 AC104685.1-201ENST00000502445 371 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC188H7C350 VN1R104P-201ENST00000505115 1009 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AC024589.1-201ENST00000512207 263 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 RNA5SP216-201ENST00000516111 123 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC188H7C350 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC188H7C350 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC188H7C350 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC188H7C350 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC188H7C350 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC188H7C350 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC188H7C350 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC188H7C350 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC188H7C350 OR4K8P-201ENST00000578842 1048 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC188H7C350 AC006254.3-201ENST00000603353 884 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AC112220.3-201ENST00000605502 502 ntBASIC3.55□□□□□ -1.84
CCDC188H7C350 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms