Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AL132657.2-201ENST00000564417 358 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AL022067.1-201ENST00000602426 454 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC008745.1-201ENST00000604064 271 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC107294.3-201ENST00000609211 526 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC104763.3-201ENST00000613765 618 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AL161629.2-201ENST00000615347 275 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AL357080.1-201ENST00000617394 239 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AL158163.2-201ENST00000619110 700 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC002550.2-201ENST00000621246 394 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC090617.7-201ENST00000623952 126 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC099654.7-201ENST00000635788 2127 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC010680.1-201ENST00000590024 3590 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AL079343.1-201ENST00000572358 1771 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 MTCO1P9-201ENST00000505577 1534 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 SNORD9-201ENST00000362566 104 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 RNU6-198P-201ENST00000384258 104 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 RSL24D1P1-201ENST00000404972 493 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 RNA5SP317-201ENST00000410176 116 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 RNA5SP311-201ENST00000411290 116 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AL590383.1-201ENST00000428602 75 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AL117339.2-201ENST00000430475 180 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 ARL4AP4-201ENST00000434170 518 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AC009969.1-201ENST00000438726 172 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 snoU13.8-201ENST00000458890 104 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 DSTNP2-201ENST00000504533 515 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 RNA5SP315-201ENST00000516340 116 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 RNA5SP312-201ENST00000517068 116 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 RNA5SP380-201ENST00000517190 98 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 RANP9-201ENST00000519957 271 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AC118942.1-201ENST00000529674 1035 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AC125611.2-201ENST00000551907 647 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 TRAV37-201ENST00000553906 342 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AMZ2P1-203ENST00000565833 850 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 HMGB1P6-201ENST00000569046 646 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 VN1R83P-201ENST00000595685 445 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AC004067.1-201ENST00000608733 700 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AL354798.1-201ENST00000622505 329 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AC091903.1-201ENST00000624322 454 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AC073476.4-201ENST00000628409 72 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 MIR492-201ENST00000638676 116 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 AC093831.2-201ENST00000624393 3427 ntBASIC2.42□□□□□ -2.02
SMKR1H3BMG3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
SMKR1H3BMG3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 MFSD8-233ENST00000641482 4860 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 SPRR2C-201ENST00000290702 219 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 RNU6-1000P-201ENST00000391066 106 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 RPL32P23-201ENST00000397237 405 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AL590084.1-201ENST00000407885 387 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC245054.2-201ENST00000415639 319 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC018630.2-202ENST00000422992 927 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 PPP1R11P2-201ENST00000423543 382 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC012498.1-201ENST00000424037 437 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AL050321.1-201ENST00000432363 400 ntBASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.41□□□□□ -2.02
SMKR1H3BMG3 RNU7-136P-201ENST00000458819 69 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms