Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC110768.1-201ENST00000509222 400 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 COX6CP8-201ENST00000522620 226 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 HIGD1AP10-201ENST00000527837 282 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC018630.1-201ENST00000541376 925 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 UBE2NP1-201ENST00000545592 458 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AL158211.1-201ENST00000566763 763 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC141257.3-201ENST00000572906 215 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 RNU1-30P-201ENST00000606575 163 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AL450489.1-201ENST00000612071 468 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC015967.1-201ENST00000619893 476 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC079684.1-201ENST00000621405 437 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AL356596.1-201ENST00000624230 379 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC017037.3-201ENST00000625016 472 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NPIPA3F8WFD2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NPIPA3F8WFD2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.34□□□□□ -1.88
NPIPA3F8WFD2 SGO1P2-201ENST00000429458 1589 ntBASIC3.34□□□□□ -1.88
NPIPA3F8WFD2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 RNU6-253P-201ENST00000384730 105 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 SOD2P1-201ENST00000396543 562 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 MIR320C1-201ENST00000408566 88 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 RNU2-71P-201ENST00000411395 189 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AC007390.1-201ENST00000415722 356 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AL137014.1-201ENST00000420490 1226 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AC005005.2-201ENST00000420779 380 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AL008629.1-201ENST00000438615 184 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 CYCSP35-201ENST00000451978 304 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AC099563.1-201ENST00000456086 418 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 ARPC3P2-201ENST00000457786 533 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 snoU13.8-201ENST00000458890 104 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 VN1R17P-201ENST00000472048 1090 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AL049830.2-201ENST00000480072 201 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 RN7SL293P-201ENST00000481765 281 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 HMGB1P36-201ENST00000487709 576 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AL024509.2-201ENST00000493462 493 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AC021146.1-201ENST00000511202 716 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 NARSP2-201ENST00000518524 679 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 OR5B10P-201ENST00000532869 642 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 DUXAP6-201ENST00000553858 601 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 OR4K8P-201ENST00000578842 1048 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 AC020914.6-201ENST00000594327 272 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 RNU6-88P-201ENST00000606801 100 ntBASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPA3F8WFD2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC116096.1-201ENST00000566804 2314 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 RNU6-462P-201ENST00000362659 105 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 PTMAP5-201ENST00000393073 333 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 HMGB3P20-201ENST00000417997 600 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AL035407.1-201ENST00000429211 571 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AC073063.1-201ENST00000434352 607 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 YWHAZP7-201ENST00000436906 631 ntBASIC3.32□□□□□ -1.88
NPIPA3F8WFD2 AF228730.2-201ENST00000438784 848 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms