Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SRRM4A7MD48 HSPA8P1-201ENST00000425843 1833 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SRRM4A7MD48 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 MIR372-201ENST00000362225 67 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 RNU6-223P-201ENST00000362830 107 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC068538.1-201ENST00000376856 336 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SRRM4A7MD48 RNU1-13P-201ENST00000384499 162 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 MIR135A2-201ENST00000384854 100 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SRRM4A7MD48 HSPE1P8-201ENST00000406997 288 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 MIR1183-201ENST00000408856 89 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 MTND2P18-201ENST00000419962 1030 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 OR4C10P-201ENST00000434991 931 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 CDC27P1-201ENST00000445384 715 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AL162151.2-201ENST00000448875 158 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AP1S2P1-201ENST00000457344 379 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 RPS3AP22-201ENST00000488297 769 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC068305.1-201ENST00000497406 726 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 FTH1P21-201ENST00000512179 511 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC026801.2-201ENST00000515352 425 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 RNA5SP208-201ENST00000516156 78 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 Y_RNA.688-201ENST00000516565 95 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC090616.2-202ENST00000584248 222 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 BNIP3P23-201ENST00000599655 511 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC015726.1-201ENST00000602353 681 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AP001330.4-201ENST00000604350 154 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AL022161.1-201ENST00000604390 213 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AL137849.1-201ENST00000604767 169 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC006338.2-201ENST00000616864 791 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC095031.1-201ENST00000623685 672 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC127502.3-201ENST00000636170 1206 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC244258.1-201ENST00000637553 1071 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.07□□□□□ -1.92
SRRM4A7MD48 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.07□□□□□ -1.92
SRRM4A7MD48 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SRRM4A7MD48 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SRRM4A7MD48 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SRRM4A7MD48 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SRRM4A7MD48 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SRRM4A7MD48 RNU6-853P-201ENST00000364306 107 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 RNA5SP97-201ENST00000365006 84 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SRRM4A7MD48 RNU6-213P-201ENST00000384051 104 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 AC009518.2-201ENST00000418056 731 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 RPL21P109-201ENST00000422213 475 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 AL117339.2-201ENST00000430475 180 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 AC114755.5-201ENST00000447760 831 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 AP000542.1-201ENST00000448473 371 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 RPS4XP5-202ENST00000449995 1334 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 ART2BP-201ENST00000453501 499 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 DNAJC19P1-201ENST00000455312 319 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 ARPC3P2-201ENST00000457786 533 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 RPL30P9-201ENST00000465586 330 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 RPL30P6-201ENST00000475925 342 ntBASIC3.06□□□□□ -1.92
SRRM4A7MD48 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SRRM4A7MD48 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.06□□□□□ -1.92
SRRM4A7MD48 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SRRM4A7MD48 AL359273.1-201ENST00000510918 627 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms