Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AL162373.1-201ENST00000620433 407 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
LINC01549A6NIU2 MFSD8-245ENST00000641743 948 ntBASIC1.39□□□□□ -2.19
LINC01549A6NIU2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 MTND4P35-201ENST00000604257 1375 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 RNU4-65P-201ENST00000410473 140 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 TRGV6-201ENST00000417928 299 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 ARL4AP4-201ENST00000434170 518 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 MRPS33P4-201ENST00000434892 317 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 USP9YP8-201ENST00000441913 500 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 CDC27P1-201ENST00000445384 715 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 TPT1P14-201ENST00000448018 505 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 RPS3P1-201ENST00000456781 192 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 FTH1P2-201ENST00000466086 412 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 CCNHP1-201ENST00000513311 678 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 RNA5SP148-201ENST00000516527 94 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 RN7SKP234-201ENST00000517173 224 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 GTF3AP2-201ENST00000557014 266 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AC026464.5-201ENST00000562497 722 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AC090616.3-201ENST00000582184 217 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AC007938.3-201ENST00000604965 623 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AC092650.2-201ENST00000619984 902 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 OR1S1-201ENST00000624470 978 ntBASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
LINC01549A6NIU2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 ZNF519P1-201ENST00000449011 1626 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AC092881.1-201ENST00000638218 2733 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AC244098.2-201ENST00000422068 99 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 PPP1R2P5-201ENST00000457256 603 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 RPL37P6-202ENST00000464216 403 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AC087879.1-201ENST00000474343 374 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AL135752.1-201ENST00000479477 471 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AC104090.1-201ENST00000506341 1171 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 MTATP6P22-201ENST00000507369 598 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 RAC1P5-201ENST00000512182 576 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AC009220.3-201ENST00000604318 586 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AC135178.6-201ENST00000605314 398 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AC091932.3-201ENST00000624223 323 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 AL137790.1-201ENST00000634283 177 ntBASIC1.37□□□□□ -2.19
LINC01549A6NIU2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01549A6NIU2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AC062016.1-201ENST00000355719 319 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 RNU1-91P-201ENST00000364746 163 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 RNU1-73P-201ENST00000383971 164 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 SNORA36C-201ENST00000384289 132 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 MIR17-201ENST00000385012 84 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 MIR134-201ENST00000385258 73 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AL138880.1-201ENST00000405824 642 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AC234782.4-201ENST00000417646 1048 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 EIF1AXP1-201ENST00000419267 435 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 NUP35P1-201ENST00000422734 947 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AC009237.8-201ENST00000445492 379 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 RNA5SP233-201ENST00000459153 113 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 RPS29P20-201ENST00000489592 171 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AC105914.1-201ENST00000511798 226 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 RNA5SP281-201ENST00000516504 135 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 MIR5195-201ENST00000583555 115 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms