Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CCDC162PA2VCL2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC162PA2VCL2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC162PA2VCL2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC162PA2VCL2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC162PA2VCL2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC008264.2-201ENST00000610193 3731 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 MTND5P7-201ENST00000413558 1798 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC244517.1-201ENST00000606030 2086 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 RNU4-35P-201ENST00000362588 141 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 RNA5SP295-201ENST00000362655 121 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 RNU6-1249P-201ENST00000363237 111 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 RNA5SP197-201ENST00000363357 119 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 SNORD51-201ENST00000384320 80 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 RNU6-878P-201ENST00000384578 110 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 RPL23AP29-201ENST00000397284 453 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 DHFRP6-201ENST00000401776 268 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AL138880.1-201ENST00000405824 642 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AL031121.1-201ENST00000406553 254 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 RPL22P18-201ENST00000417197 377 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AL590103.1-201ENST00000434488 307 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 ELOCP13-201ENST00000443934 329 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC097262.1-201ENST00000452559 548 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 NECAP1P2-201ENST00000455668 727 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 BTF3P5-201ENST00000457252 467 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC090453.1-201ENST00000495560 436 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC010587.2-201ENST00000511727 448 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AL512347.1-201ENST00000566420 503 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC034268.2-201ENST00000571784 482 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC091925.2-201ENST00000625059 256 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 AC244258.1-201ENST00000637553 1071 ntBASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC162PA2VCL2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.4□□□□□ -1.86
CCDC162PA2VCL2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.4□□□□□ -1.86
CCDC162PA2VCL2 RNU4-28P-201ENST00000364739 141 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 MIR218-2-201ENST00000385006 110 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 TAF9BP1-201ENST00000396646 746 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 MIR887-201ENST00000401258 79 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 RNA5SP107-201ENST00000411358 122 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 RPL7P46-201ENST00000425129 740 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 PSMA6P3-201ENST00000428242 164 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 MTND4P6-201ENST00000438297 472 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 HMGB1P12-201ENST00000438594 598 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC092641.1-201ENST00000440229 772 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 RPS24P6-201ENST00000452670 400 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 SUMO2P2-201ENST00000456482 255 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 VN1R17P-201ENST00000472048 1090 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 XKRY-201ENST00000510392 1100 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 IGKV2-26-201ENST00000518305 343 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC107934.2-201ENST00000518653 310 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 IGKV2D-19-201ENST00000523346 262 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AL163153.1-201ENST00000554223 283 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC128687.1-201ENST00000605304 619 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC080013.4-201ENST00000607624 649 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC092354.2-201ENST00000607786 514 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.4□□□□□ -1.87
CCDC162PA2VCL2 AC004009.2-201ENST00000623016 728 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms