Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 OR4G2P-202ENST00000641004 1759 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 Y_RNA.105-201ENST00000363182 111 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 Y_RNA.237-201ENST00000364439 102 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AC019155.1-201ENST00000382242 574 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 RNU6-842P-201ENST00000384269 107 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 SNORA24.1-201ENST00000384401 135 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 CYB5AP4-201ENST00000396692 399 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 RNU6-55P-201ENST00000411092 107 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AC140479.3-201ENST00000418944 1126 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 REREP1Y-201ENST00000422655 198 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 REREP2Y-201ENST00000439103 200 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 RPS15AP27-201ENST00000449183 343 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AC011225.1-201ENST00000457751 369 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 RPL21P104-201ENST00000464143 478 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AC104806.1-201ENST00000508720 308 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 RNA5SP384-201ENST00000516615 116 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 MIR5188-201ENST00000583467 113 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 MIR4420-201ENST00000583944 77 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AC006115.2-201ENST00000596823 202 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AC073410.2-201ENST00000603240 332 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 MIR6861-201ENST00000618657 64 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AL357559.1-201ENST00000622228 274 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AC103710.2-202ENST00000641454 2853 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AL355834.1-201ENST00000556602 3965 ntBASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNMT3AQ9Y6K1 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AC087516.1-201ENST00000561236 2428 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 STX3-208ENST00000641815 3236 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AL137141.1-201ENST00000624622 4836 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RNU1-150P-201ENST00000362491 162 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RNU6-562P-201ENST00000362731 107 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 Y_RNA.199-201ENST00000364014 102 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RNU6-1317P-201ENST00000364582 104 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 Y_RNA.352-201ENST00000365439 102 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 MIR450B-201ENST00000401182 78 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RPS3AP2-201ENST00000407190 754 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RN7SKP51-201ENST00000410781 304 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RNU4-78P-201ENST00000410940 126 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RNU2-25P-201ENST00000411041 191 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 USP9YP30-201ENST00000430729 455 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RPL21P112-201ENST00000434403 463 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AL663074.2-201ENST00000440621 479 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RPS3AP12-201ENST00000443616 753 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AP000281.1-201ENST00000444036 316 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AL162388.1-201ENST00000450912 352 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 LINC01399-202ENST00000458450 244 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RN7SL57P-201ENST00000493687 290 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RPL23AP55-201ENST00000498163 452 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AC105384.2-201ENST00000508433 640 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 RN7SKP288-201ENST00000516227 268 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 MIR3144-201ENST00000579460 79 ntBASIC5.8□□□□□ -1.48
DNMT3AQ9Y6K1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms