Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC139783.2-201ENST00000504847 1145 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 RN7SKP244-201ENST00000516513 307 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 RNU6-506P-201ENST00000516553 94 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AC023632.4-201ENST00000517783 191 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 DEFB108A-201ENST00000530110 222 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 EEF1B2P4-201ENST00000551398 348 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AC137800.2-201ENST00000574375 120 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 TPMTP1-201ENST00000592307 737 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AC103710.1-201ENST00000610003 901 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AC008250.2-201ENST00000615261 205 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AC007546.1-201ENST00000619452 559 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 OR5AK4P-201ENST00000635912 903 ntBASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX2IPQ9Y2D8 AL122126.1-201ENST00000546905 1318 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AL022578.1-201ENST00000439330 1433 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC011978.2-201ENST00000569835 2054 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 RNU6-769P-201ENST00000384407 104 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 RN7SKP177-201ENST00000410567 355 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC069218.2-201ENST00000411665 344 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 NPM1P34-201ENST00000428821 893 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 MRPS10P2-201ENST00000431226 381 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC007389.2-201ENST00000434630 306 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 HLA-N-201ENST00000437516 135 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 NANOGNBP1-201ENST00000448444 480 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC104563.1-201ENST00000476147 376 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 RPS29P19-201ENST00000479709 171 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC004924.1-201ENST00000480160 781 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 VN1R105P-201ENST00000486595 910 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC112204.1-201ENST00000502591 103 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 NDUFB4P2-201ENST00000509515 391 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 NPM1P41-201ENST00000512920 831 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC034159.1-201ENST00000513885 583 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 COX6CP8-201ENST00000522620 226 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC022861.1-201ENST00000522981 663 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC009101.1-201ENST00000568135 242 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AC090578.1-201ENST00000604955 591 ntBASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSX2IPQ9Y2D8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 OR4G2P-201ENST00000328113 903 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 AC007685.1-201ENST00000329806 452 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 RNU6-809P-201ENST00000384461 107 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 AL031679.1-201ENST00000400616 525 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 AL024474.1-201ENST00000404655 591 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 MIR1911-201ENST00000410783 80 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 RPS3AP3-201ENST00000411933 242 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 RPL30P3-201ENST00000424262 333 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 BX890604.2-201ENST00000427883 474 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 ELOCP18-201ENST00000434209 337 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 AC073614.1-201ENST00000438690 650 ntBASIC4.46□□□□□ -1.7
SSX2IPQ9Y2D8 USP9YP34-201ENST00000453983 808 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms