Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 RPL7P5-201ENST00000471472 736 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AC091488.1-201ENST00000604239 660 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AC091046.2-201ENST00000620775 665 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AL109809.4-201ENST00000603520 2185 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 MTND4P35-201ENST00000604257 1375 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 RPL23AP16-201ENST00000441715 421 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AC087385.1-201ENST00000475062 312 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AC108078.2-201ENST00000510750 236 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AL359821.1-201ENST00000605519 182 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AC012531.5-201ENST00000611375 151 ntBASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHANK2Q9UPX8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SHANK2Q9UPX8 MTND5P23-201ENST00000430812 1655 ntBASIC3.15□□□□□ -1.9
SHANK2Q9UPX8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.15□□□□□ -1.91
SHANK2Q9UPX8 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHANK2Q9UPX8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.15□□□□□ -1.91
SHANK2Q9UPX8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHANK2Q9UPX8 AL445646.1-201ENST00000431784 216 ntBASIC3.15□□□□□ -1.91
SHANK2Q9UPX8 SDR42E1P3-201ENST00000438345 502 ntBASIC3.15□□□□□ -1.91
SHANK2Q9UPX8 RN7SKP96-201ENST00000516948 297 ntBASIC3.15□□□□□ -1.91
SHANK2Q9UPX8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.15□□□□□ -1.91
SHANK2Q9UPX8 AC010297.1-201ENST00000623948 149 ntBASIC3.15□□□□□ -1.91
SHANK2Q9UPX8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 RPL21P2-201ENST00000440049 481 ntBASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 AC005840.1-201ENST00000498412 377 ntBASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 AC010265.1-201ENST00000513509 211 ntBASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 RPP40P2-201ENST00000603596 712 ntBASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 AL359198.2-201ENST00000611836 194 ntBASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 AP005901.5-201ENST00000545779 1796 ntBASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHANK2Q9UPX8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 SNORA26.7-201ENST00000391288 122 ntBASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 AC106901.1-201ENST00000425086 698 ntBASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 RNU6-964P-201ENST00000516524 69 ntBASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 RNA5SP480-201ENST00000516840 109 ntBASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 YWHAEP7-203ENST00000622054 312 ntBASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHANK2Q9UPX8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 OR4K11P-201ENST00000431829 904 ntBASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 AC089999.1-201ENST00000460336 374 ntBASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 TBCAP3-201ENST00000512475 312 ntBASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 AC004486.1-201ENST00000546846 233 ntBASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 AC120053.1-201ENST00000607706 736 ntBASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.12□□□□□ -1.91
SHANK2Q9UPX8 AC005005.2-201ENST00000420779 380 ntBASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 AC239798.3-201ENST00000454459 408 ntBASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 AC068781.1-201ENST00000488231 618 ntBASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 RNU6-826P-201ENST00000516827 104 ntBASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 AC087241.2-201ENST00000535801 324 ntBASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 AL137847.3-201ENST00000611521 109 ntBASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 AC002064.3-201ENST00000623448 346 ntBASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SHANK2Q9UPX8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 DHFRP5-201ENST00000406944 564 ntBASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 AC233279.1-201ENST00000455300 423 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms