Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC104763.2-201ENST00000604179 382 ntBASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 MTND2P41-201ENST00000637599 773 ntBASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 OR11H5P-202ENST00000641612 1325 ntBASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 AC002075.2-201ENST00000425207 252 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 MTND2P20-201ENST00000440805 661 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 RPL39P6-201ENST00000448289 150 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 HMGB1P28-201ENST00000507778 552 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 AC109445.1-201ENST00000512356 383 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 MIR4738-201ENST00000579134 87 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 OR4K7P-201ENST00000580232 945 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 AL669831.4-202ENST00000590817 238 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 KC877982.1-201ENST00000602313 470 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 MTND3P19-201ENST00000603825 345 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 AC069304.2-201ENST00000605154 435 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 HMGN2P28-201ENST00000606102 262 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 U6.101-201ENST00000637707 76 ntBASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM4Q9ULL8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 OR56A5-201ENST00000340110 738 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 AC007899.1-201ENST00000412776 775 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 TIMM9P2-201ENST00000419324 266 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 RPS12P5-201ENST00000423449 371 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 AC105272.1-201ENST00000438604 198 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 RPL23AP76-201ENST00000441860 458 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 SLC31A1P1-201ENST00000451221 567 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 snoU13.3-201ENST00000459441 104 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 NARSP2-201ENST00000518524 679 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 GTF3AP2-201ENST00000557014 266 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 AC012182.1-201ENST00000570133 895 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 AL450336.1-201ENST00000605180 586 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 AL157817.1-201ENST00000614264 790 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 SNORD39.4-201ENST00000620099 78 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 AP002782.1-201ENST00000623107 614 ntBASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM4Q9ULL8 AL592310.1-201ENST00000414330 671 ntBASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 MTND4P6-201ENST00000438297 472 ntBASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 AC116353.3-201ENST00000511215 249 ntBASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 AC006270.2-201ENST00000578523 652 ntBASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 MIR2682-201ENST00000580305 110 ntBASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 AL391001.1-201ENST00000602747 715 ntBASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 AC097478.2-201ENST00000610572 514 ntBASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 AC092650.2-201ENST00000619984 902 ntBASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC6.15□□□□□ -1.42
SHROOM4Q9ULL8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 AL445529.1-201ENST00000398713 389 ntBASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 FNDC3CP-201ENST00000420795 1155 ntBASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 CR769776.1-201ENST00000441254 787 ntBASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 ACTG1P13-201ENST00000486987 1043 ntBASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 AC079395.1-201ENST00000510981 262 ntBASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 SLC2A13P1-201ENST00000531560 322 ntBASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 AC009220.3-201ENST00000604318 586 ntBASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHROOM4Q9ULL8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 AL157700.1-201ENST00000561973 1432 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 NUP58P1-201ENST00000502546 1738 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 RNU6-263P-201ENST00000363811 107 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 AC126124.2-201ENST00000413542 321 ntBASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.14□□□□□ -1.43
SHROOM4Q9ULL8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms