Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC090071.1-201ENST00000507713 644 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 CBX3P3-201ENST00000508108 532 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 RN7SKP82-201ENST00000516786 223 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 RNU6-579P-201ENST00000516879 102 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 IGHV3-32-201ENST00000519182 355 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC084035.1-201ENST00000634543 607 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.84□□□□□ -1.8
SIX4Q9UIU6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SIX4Q9UIU6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SIX4Q9UIU6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SIX4Q9UIU6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 MIR449B-201ENST00000384995 97 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 MIR670-201ENST00000390142 98 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 RNU2-21P-201ENST00000410368 188 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 RN7SKP53-201ENST00000411337 315 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 RPS3AP9-201ENST00000417027 792 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 RPL7P30-201ENST00000420888 709 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AC069157.1-201ENST00000421749 137 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 ATP5JP1-201ENST00000431631 322 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 RPS26P56-201ENST00000444468 240 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 RPL21P23-201ENST00000446654 460 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 MEMO1P3-201ENST00000459811 302 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 HMGB1P21-201ENST00000502313 581 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AC026412.2-201ENST00000512270 1075 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AP006245.1-201ENST00000522549 120 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AP000873.5-201ENST00000533906 236 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AC022880.1-201ENST00000534017 973 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AC008127.2-201ENST00000549925 1075 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 VN1R79P-201ENST00000593540 513 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 BNIP3P11-201ENST00000603878 563 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 RNU6-88P-201ENST00000606801 100 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AL139286.2-201ENST00000606838 396 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AC012360.2-201ENST00000609349 391 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AC025594.3-201ENST00000613068 790 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 RMST_9.1-201ENST00000619945 193 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 U4.6-201ENST00000621618 127 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AL365440.1-201ENST00000436135 2167 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AL031985.3-201ENST00000565390 2449 ntBASIC3.83□□□□□ -1.8
SIX4Q9UIU6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIX4Q9UIU6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 MTCO1P23-201ENST00000415223 1526 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AP002907.1-201ENST00000606361 1430 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 RNU6-462P-201ENST00000362659 105 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 RNU6-501P-201ENST00000364072 100 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 RNU6-777P-201ENST00000364265 104 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 U3.39-201ENST00000408569 239 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 RPS29P4-201ENST00000414733 161 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC093578.1-201ENST00000415219 368 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 CRYBB2P1-203ENST00000415709 538 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 RAC1P3-201ENST00000416129 580 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC096632.1-201ENST00000427395 310 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AL365184.2-201ENST00000431139 435 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 RPL23AP16-201ENST00000441715 421 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 USP9YP29-201ENST00000445112 563 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 COX6CP12-201ENST00000446748 202 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 ELOCP30-201ENST00000447108 299 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms