Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AL353705.1-201ENST00000433468 480 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 GTF2IP7-202ENST00000436677 309 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC092393.1-201ENST00000439625 742 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC093392.2-201ENST00000450682 337 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC104308.1-201ENST00000454621 333 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC091179.1-201ENST00000461606 579 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC113347.3-201ENST00000509113 148 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC016065.2-201ENST00000514530 444 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AL139174.1-201ENST00000531489 886 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC006963.1-201ENST00000624003 1052 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 AC098679.5-201ENST00000624394 571 ntBASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
APOBEC3BQ9UH17 MTND5P31-201ENST00000419366 1374 ntBASIC3.15□□□□□ -1.9
APOBEC3BQ9UH17 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
APOBEC3BQ9UH17 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.15□□□□□ -1.9
APOBEC3BQ9UH17 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
APOBEC3BQ9UH17 RNU6-115P-201ENST00000364310 107 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 SNORD116.1-201ENST00000365628 92 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 RNU6-1300P-201ENST00000391046 108 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 RN7SKP285-201ENST00000410137 318 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AL161449.1-201ENST00000414531 1199 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 HMGB3P23-201ENST00000414981 585 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 GTF2IP23-201ENST00000423746 351 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 HSPE1P28-201ENST00000443139 211 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AL590399.6-201ENST00000446396 307 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC087312.1-201ENST00000471411 480 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC087879.1-201ENST00000474343 374 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 RPS26P21-201ENST00000475397 348 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 MTCO2P32-201ENST00000514865 403 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 RN7SKP60-201ENST00000516985 239 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 OR8K4P-201ENST00000534608 872 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC011602.1-201ENST00000546484 331 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 TRAV37-201ENST00000553906 342 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AADACP1-206ENST00000561502 1193 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 MTCYBP28-201ENST00000566728 1132 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 MIR2682-201ENST00000580305 110 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 SNORD39.3-201ENST00000584451 71 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AL451007.1-201ENST00000595491 289 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC006539.2-201ENST00000601729 572 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC024257.5-201ENST00000612739 531 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC018692.3-201ENST00000623929 123 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 FAM157B-203ENST00000639350 358 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AC093010.3-201ENST00000570269 15214 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 OR5BR1P-201ENST00000524992 1330 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 Z99496.1-201ENST00000469424 1477 ntBASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
APOBEC3BQ9UH17 AL365361.1-201ENST00000566942 3481 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 AC004925.1-201ENST00000624256 2706 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 AL021368.2-201ENST00000606125 5352 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 NACA3P-201ENST00000359690 648 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 RNU6-335P-201ENST00000364563 113 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 RNU1-140P-201ENST00000365040 165 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 Y_RNA.408-201ENST00000383987 102 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 RNU6-921P-201ENST00000384361 107 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 RNU6-441P-201ENST00000384545 106 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 RNU6-636P-201ENST00000384598 107 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 U3.26-201ENST00000391236 204 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 TMSB4XP8-201ENST00000402089 135 ntBASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
APOBEC3BQ9UH17 TMSB4XP6-201ENST00000415187 135 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 241.8 ms