Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC019226.1-201ENST00000625666 515 ntBASIC4.06□□□□□ -1.76
LRFN1Q9P244 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
LRFN1Q9P244 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LRFN1Q9P244 AL133383.2-201ENST00000622958 2336 ntBASIC4.06□□□□□ -1.76
LRFN1Q9P244 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LRFN1Q9P244 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
LRFN1Q9P244 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.06□□□□□ -1.76
LRFN1Q9P244 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.06□□□□□ -1.76
LRFN1Q9P244 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.06□□□□□ -1.76
LRFN1Q9P244 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LRFN1Q9P244 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRFN1Q9P244 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 RNU6-223P-201ENST00000362830 107 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 RNU6-623P-201ENST00000363143 105 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 RNU6-76P-201ENST00000384060 104 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 SNORA75-201ENST00000384158 137 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 SNORA37-201ENST00000384504 129 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AL603766.1-201ENST00000407763 664 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 SNORA11F-201ENST00000408237 128 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 RNU6-248P-201ENST00000410720 107 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 RPL23AP26-201ENST00000412728 464 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 CDK8P2-201ENST00000415020 547 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC006366.1-201ENST00000422002 759 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 Z74021.1-201ENST00000423610 407 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 RPL21P91-201ENST00000429231 479 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AL589823.1-201ENST00000429577 183 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC024082.2-201ENST00000434771 238 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AL022238.1-201ENST00000442557 355 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 MTND6P13-201ENST00000443510 523 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 RPL21P89-201ENST00000444021 467 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC099563.1-201ENST00000456086 418 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 UQCRHP4-201ENST00000471686 272 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC092451.1-201ENST00000480211 153 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC105137.1-201ENST00000484355 562 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 RN7SL812P-201ENST00000493791 279 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC020893.1-201ENST00000502452 580 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 MTCO3P7-201ENST00000510008 774 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 FTH1P9-201ENST00000513251 355 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 SNORA31.22-201ENST00000517204 135 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 MIR3146-201ENST00000580367 79 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC079587.1-201ENST00000603846 277 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AL139286.1-201ENST00000604465 483 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC121334.2-201ENST00000605387 271 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 HULC.1-201ENST00000612720 240 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 ZYXP1-201ENST00000617638 118 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC091905.2-201ENST00000623143 306 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC140479.6-201ENST00000633535 357 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
LRFN1Q9P244 DDX10P1-201ENST00000448545 1933 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 AC024560.2-201ENST00000507981 1497 ntBASIC4.05□□□□□ -1.76
LRFN1Q9P244 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN1Q9P244 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN1Q9P244 RNA5SP366-201ENST00000365454 123 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 RNU1-63P-201ENST00000383902 164 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 SNORA70C-201ENST00000384538 135 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 RNU6-297P-201ENST00000384636 107 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 AL109755.1-201ENST00000401791 649 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 RPS3AP3-201ENST00000411933 242 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 RPS20P14-201ENST00000412545 360 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 EIF4EP1-201ENST00000422311 642 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 EIF1P3-201ENST00000423841 334 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 NANOGP6-201ENST00000429190 847 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AL132765.1-201ENST00000434165 553 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRFN1Q9P244 RPL26P6-201ENST00000440913 438 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 RPS11P1-201ENST00000451072 473 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 AL121877.1-201ENST00000453704 622 ntBASIC4.04□□□□□ -1.76
LRFN1Q9P244 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.04□□□□□ -1.76
LRFN1Q9P244 RPL21P104-201ENST00000464143 478 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms