Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 SNORD3H-201ENST00000384486 214 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AL359704.1-201ENST00000411586 781 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 OR5BE1P-201ENST00000425977 939 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 RSL24D1P6-201ENST00000426934 401 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 UBE2V1P13-201ENST00000436983 439 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 TAF9P1-201ENST00000445421 515 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AC010655.1-201ENST00000449336 292 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 TAF9P2-201ENST00000454958 515 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 MTCO1P42-201ENST00000457379 726 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 RPL38P1-201ENST00000460914 211 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AC010285.1-201ENST00000470580 392 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 RN7SKP122-201ENST00000515923 296 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 RNU6-1003P-201ENST00000517099 105 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 MTND4LP18-201ENST00000526864 291 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AC012414.6-201ENST00000568241 401 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 MIR3138-201ENST00000585238 82 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 UBE2L4-201ENST00000587688 464 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AC020914.4-201ENST00000597690 277 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AL590392.1-201ENST00000604960 446 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AC025594.3-201ENST00000613068 790 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AC027807.2-201ENST00000616099 408 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AL353748.2-201ENST00000622148 471 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AL158801.5-201ENST00000623123 465 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 OR5BE1P-202ENST00000641168 1176 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 AP001350.1-201ENST00000601906 1524 ntBASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.73□□□□□ -1.81
SLC6A13Q9NSD5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC009902.3-201ENST00000606235 2172 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 RNA5SP189-201ENST00000364920 115 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 RNU5E-5P-201ENST00000365379 116 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 MIR607-201ENST00000385241 96 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 HMGN2P8-201ENST00000391458 268 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 CCDC58P2-201ENST00000417131 366 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 MTCO2P16-201ENST00000436962 677 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 SKP1P1-201ENST00000438081 489 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AL500522.2-201ENST00000448562 343 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC098824.1-201ENST00000453565 980 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 snoU13.24-201ENST00000458998 104 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 RPL9P32-201ENST00000464118 620 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 UQCRHP4-201ENST00000471686 272 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 RPL31P13-201ENST00000484151 370 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 NDUFB4P9-201ENST00000511646 388 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC103783.1-201ENST00000520506 373 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC109635.4-202ENST00000531666 412 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 YPEL5P3-201ENST00000547227 352 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 MIR5697-201ENST00000578045 78 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC244505.7-201ENST00000599675 272 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC068276.1-201ENST00000605793 379 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 MIR8059-201ENST00000620427 81 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC092125.1-201ENST00000562568 1995 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC010733.2-201ENST00000589496 5702 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 MTND5P33-201ENST00000571250 1450 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AC011460.1-201ENST00000636268 1834 ntBASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
SLC6A13Q9NSD5 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SLC6A13Q9NSD5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.71□□□□□ -1.81
SLC6A13Q9NSD5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms