Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RNU6-1078P-201ENST00000364522 103 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 MIR135A2-201ENST00000384854 100 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 OR8F1P-201ENST00000425243 930 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 MTCO1P39-201ENST00000426148 480 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 SKP1P1-201ENST00000438081 489 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 FAM103A2P-201ENST00000444122 354 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 NUTF2P3-201ENST00000448540 384 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 RPS17P13-201ENST00000448974 407 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AC098824.1-201ENST00000453565 980 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 HMGN2P7-201ENST00000456186 273 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AC109486.1-201ENST00000486833 374 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AC069499.1-201ENST00000489433 509 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AL132838.2-201ENST00000492041 314 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 VN1R104P-201ENST00000505115 1009 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 MTND5P13-201ENST00000513046 1079 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AC117532.1-201ENST00000514638 323 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AC025881.1-201ENST00000518851 512 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 RAB9BP1-201ENST00000519581 626 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 HMGN1P28-201ENST00000521340 364 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AP003497.1-201ENST00000528472 562 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 MIR4307-201ENST00000582802 84 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AC008507.1-201ENST00000587506 734 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AL022161.1-201ENST00000604390 213 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AL022099.1-201ENST00000604551 712 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 MIR6868-201ENST00000611215 58 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AP001486.2-201ENST00000561652 5113 ntBASIC3.82□□□□□ -1.8
BRF2Q9HAW0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.82□□□□□ -1.8
BRF2Q9HAW0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC009902.3-201ENST00000606235 2172 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 SNORD116-1-201ENST00000384335 95 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 RNU6-809P-201ENST00000384461 107 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 Y_RNA.548-201ENST00000384656 105 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 RNA5SP129-201ENST00000410276 118 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 MTND1P21-201ENST00000412991 285 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 COX6CP12-201ENST00000446748 202 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 EPS15P1-201ENST00000448836 336 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 RPL7P24-201ENST00000493052 752 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 NDUFB4P9-201ENST00000511646 388 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC105914.1-201ENST00000511798 226 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC026726.1-201ENST00000512859 601 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 HIGD1AP10-201ENST00000527837 282 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 CYCSP29-201ENST00000533731 318 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 BNIP3P5-201ENST00000562290 498 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC091489.2-201ENST00000566263 604 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC083760.1-201ENST00000589621 670 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 ARF4P1-201ENST00000605447 541 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AL158211.4-201ENST00000606988 584 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 Z69908.1-201ENST00000622603 247 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC091965.5-201ENST00000624785 342 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC244258.1-201ENST00000637553 1071 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC092125.1-201ENST00000562568 1995 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 AC011460.1-201ENST00000636268 1834 ntBASIC3.81□□□□□ -1.8
BRF2Q9HAW0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRF2Q9HAW0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms