Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AC006504.1-201ENST00000562493 3666 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 SNORA51.6-201ENST00000384151 125 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 MTCO2P21-201ENST00000419780 677 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 USP9YP11-201ENST00000427537 717 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 MTCYBP11-201ENST00000447254 1109 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC104073.1-201ENST00000451988 151 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 RPL31P50-201ENST00000471002 296 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 RPS29P26-201ENST00000477483 171 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AP000926.1-201ENST00000479573 241 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 RN7SL432P-201ENST00000484057 298 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 NCOR1P1-202ENST00000486162 291 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC093767.1-201ENST00000504523 156 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC009812.2-201ENST00000517657 457 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 IGKV2D-36-201ENST00000518643 226 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AP000926.4-201ENST00000527351 454 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 MIR2682-201ENST00000580305 110 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC020914.4-201ENST00000597690 277 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 HMGB1P50-201ENST00000605814 607 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AP000484.1-201ENST00000620067 1252 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC097520.1-201ENST00000624435 385 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 AC120349.2-201ENST00000625002 298 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 MIR4278-201ENST00000636094 69 ntBASIC3.93□□□□□ -1.78
ZNF541Q9H0D2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 ZNF734P-201ENST00000419494 1534 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 RNA5SP322-201ENST00000363617 119 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 SNORA7.4-201ENST00000384249 137 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 MIR506-201ENST00000384998 124 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC016769.3-201ENST00000396562 315 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AL139413.1-201ENST00000421309 217 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AL590399.6-201ENST00000446396 307 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 ANKRD26P4-201ENST00000455755 950 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC146507.1-201ENST00000468335 354 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC010587.2-201ENST00000511727 448 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 RN7SKP116-201ENST00000516902 319 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC026407.1-201ENST00000518369 204 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 OR5AK1P-201ENST00000524837 922 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 SLC2A13P1-201ENST00000531560 322 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC023050.2-201ENST00000544968 387 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AL133457.1-201ENST00000564251 987 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC245036.5-201ENST00000596330 847 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 VN1R82P-201ENST00000601481 356 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC008083.4-201ENST00000615076 444 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC130650.2-201ENST00000618736 2403 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 AC116096.1-201ENST00000566804 2314 ntBASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF541Q9H0D2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 RIOK3P1-201ENST00000418778 1528 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 SNORD82-201ENST00000365530 70 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 RNU6-83P-201ENST00000384568 112 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 MIR3074-201ENST00000384885 81 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 EIF5P1-201ENST00000400019 1231 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 RPL31P2-201ENST00000413849 377 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 FTH1P6-201ENST00000430768 320 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AL139132.1-201ENST00000431587 344 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC093281.2-201ENST00000510153 597 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC112673.1-201ENST00000513168 575 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.91□□□□□ -1.78
ZNF541Q9H0D2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms