Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC093591.1-201ENST00000491435 481 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 RPL21P16-201ENST00000495531 483 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 SNORD59.2-201ENST00000516873 68 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AP000873.5-201ENST00000533906 236 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 OR7K1P-201ENST00000546439 926 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 AC064859.1-201ENST00000624741 174 ntBASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPF3BQ9BZI7 RNU6-1243P-201ENST00000364028 107 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 RPS7P2-201ENST00000435134 607 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 SNORD109B-201ENST00000458961 67 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 SNORD109A-201ENST00000459128 67 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 AC017007.3-201ENST00000479865 435 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 KLHL2P1-201ENST00000508691 521 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 RNA5SP24-201ENST00000516478 95 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 RNU6-56P-201ENST00000516986 93 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 AC104997.1-201ENST00000519761 717 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 CKS1BP7-201ENST00000522230 235 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 BX664608.1-201ENST00000610519 487 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 AC103798.2-201ENST00000624292 632 ntBASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPF3BQ9BZI7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 RNU6-50P-201ENST00000362356 103 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 U8.2-201ENST00000363156 134 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 MIR592-201ENST00000384959 97 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 RNU6-837P-201ENST00000391056 108 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 AL360182.1-201ENST00000397433 468 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 AC010385.1-201ENST00000412374 256 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 RPS20P25-201ENST00000412447 352 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 AC011816.1-201ENST00000441346 546 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 Z99714.1-201ENST00000450463 807 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 AP002345.1-201ENST00000456493 928 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 snoU13.15-201ENST00000459407 104 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 AC128713.1-201ENST00000471495 306 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 AC098799.2-201ENST00000509466 868 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 HMGB1P47-201ENST00000511281 589 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 SNORA31.21-201ENST00000517180 77 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 RNU6-711P-201ENST00000517255 106 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 AC128657.1-201ENST00000549459 145 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 SERPINE4P-201ENST00000554978 281 ntBASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
UPF3BQ9BZI7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 AL359893.1-201ENST00000447628 1580 ntBASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 USP9YP20-201ENST00000419224 558 ntBASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 AC233728.2-201ENST00000425348 757 ntBASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 RPL17P49-201ENST00000443728 411 ntBASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 RSL24D1P2-201ENST00000445584 366 ntBASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 SETP2-201ENST00000553886 926 ntBASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 AC009268.1-201ENST00000561352 1203 ntBASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 BNIP3P7-201ENST00000605641 516 ntBASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 AC073111.2-201ENST00000605657 1075 ntBASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 AL136520.1-201ENST00000600311 1322 ntBASIC3.09□□□□□ -1.91
UPF3BQ9BZI7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
UPF3BQ9BZI7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.09□□□□□ -1.92
UPF3BQ9BZI7 RNU6-629P-201ENST00000384061 103 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AL512504.1-201ENST00000415494 778 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 WASF1P1-201ENST00000447560 1131 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AC008571.1-201ENST00000467232 300 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 HSPE1P6-201ENST00000479457 291 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 MTCO3P42-201ENST00000509488 518 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 AC034159.1-201ENST00000513885 583 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 MTCO3P39-201ENST00000514812 518 ntBASIC3.08□□□□□ -1.92
UPF3BQ9BZI7 RNU4-29P-201ENST00000515943 174 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms