Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AL022099.1-201ENST00000604551 712 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 DISC2.1-201ENST00000612827 205 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AC004696.1-201ENST00000614345 607 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AP003122.6-201ENST00000623831 495 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC108467.2-201ENST00000617640 1597 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 Y_RNA.160-201ENST00000363677 92 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 SNORA62.1-201ENST00000364287 154 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 Y_RNA.255-201ENST00000364581 97 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 RNA5SP235-201ENST00000365411 114 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 RN7SKP126-201ENST00000411143 300 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 CKS1BP6-201ENST00000424932 240 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC079780.1-201ENST00000428259 207 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 MRPS17P3-201ENST00000465453 385 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC108751.2-201ENST00000469993 231 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AL163973.1-201ENST00000484753 577 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 MTCYBP18-201ENST00000501056 747 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC008549.1-201ENST00000512900 643 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC103843.2-201ENST00000530523 682 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 MIR4480-201ENST00000582492 71 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 SNORD84-203ENST00000584275 78 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 SNRPGP15-201ENST00000600149 222 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC008945.2-201ENST00000606056 604 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 AC025253.1-201ENST00000613623 543 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 EXOC5P1-201ENST00000510543 1969 ntBASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM55Q9BYV6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM55Q9BYV6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM55Q9BYV6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM55Q9BYV6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM55Q9BYV6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC110754.1-201ENST00000399740 601 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC093106.2-201ENST00000428212 385 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC006466.1-201ENST00000438721 289 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 RPS29P10-201ENST00000439197 166 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 RPS11P7-201ENST00000442125 465 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 RPS29P15-201ENST00000458329 171 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 RNU7-182P-201ENST00000459009 62 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC009127.1-201ENST00000467090 155 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 GMFBP1-201ENST00000467831 427 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 RPL23AP2-201ENST00000471227 466 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 SNORA31.20-201ENST00000517111 133 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC008489.1-201ENST00000524271 483 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC022882.1-201ENST00000532142 501 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC012417.1-201ENST00000582307 1039 ntBASIC5□□□□□ -1.61
TRIM55Q9BYV6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5□□□□□ -1.61
TRIM55Q9BYV6 RN7SL52P-201ENST00000584271 284 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms