Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC099778.2-201ENST00000610904 211 ntBASIC2.76□□□□□ -1.97
FOXC2Q99958 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
FOXC2Q99958 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.76□□□□□ -1.97
FOXC2Q99958 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
FOXC2Q99958 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
FOXC2Q99958 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
FOXC2Q99958 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
FOXC2Q99958 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
FOXC2Q99958 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
FOXC2Q99958 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
FOXC2Q99958 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
FOXC2Q99958 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXC2Q99958 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.75□□□□□ -1.97
FOXC2Q99958 RNU6-839P-201ENST00000363347 108 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 RPS3AP26-201ENST00000398259 784 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 RNU6-1077P-201ENST00000410506 102 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 MRPL50P2-201ENST00000416821 482 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 RPS15AP6-201ENST00000420703 385 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 RPL31P12-201ENST00000422587 358 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXC2Q99958 AC006989.1-201ENST00000427212 131 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 MOB1AP1-201ENST00000430903 535 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.75□□□□□ -1.97
FOXC2Q99958 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXC2Q99958 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXC2Q99958 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXC2Q99958 RPL23AP44-201ENST00000482216 473 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXC2Q99958 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXC2Q99958 AC104629.1-201ENST00000494226 508 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXC2Q99958 AC091860.1-201ENST00000505723 432 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AC008885.1-201ENST00000514930 301 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 SNORD59.2-201ENST00000516873 68 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 NDUFB9P3-201ENST00000521269 501 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.75□□□□□ -1.97
FOXC2Q99958 AL139174.1-201ENST00000531489 886 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 AC026333.2-201ENST00000542164 106 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AL391156.1-201ENST00000554965 554 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.75□□□□□ -1.97
FOXC2Q99958 GTF3AP2-201ENST00000557014 266 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXC2Q99958 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXC2Q99958 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.75□□□□□ -1.97
FOXC2Q99958 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXC2Q99958 AC090666.1-201ENST00000578241 445 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXC2Q99958 MIR4666A-201ENST00000580160 79 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXC2Q99958 RPL23AP92-201ENST00000603609 255 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 RPAP2P1-201ENST00000603626 1168 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 AP005229.2-201ENST00000609980 697 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 AC008083.4-201ENST00000615076 444 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.75□□□□□ -1.97
FOXC2Q99958 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 MAPK10-362ENST00000641864 4484 ntBASIC2.75□□□□□ -1.97
FOXC2Q99958 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
FOXC2Q99958 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXC2Q99958 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.75□□□□□ -1.97
FOXC2Q99958 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.75□□□□□ -1.97
FOXC2Q99958 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
FOXC2Q99958 GDI2P1-201ENST00000429312 1336 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 CR383658.2-201ENST00000547576 1525 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
FOXC2Q99958 RNA5SP197-201ENST00000363357 119 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 RNU6-207P-201ENST00000384137 107 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 SNORA7.4-201ENST00000384249 137 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
FOXC2Q99958 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.74□□□□□ -1.97
FOXC2Q99958 BX890604.2-201ENST00000427883 474 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 AC079780.1-201ENST00000428259 207 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 FO393414.1-201ENST00000428697 1184 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 ATP5C1P1-201ENST00000441945 895 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 RPL36AP33-201ENST00000450395 310 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.74□□□□□ -1.97
FOXC2Q99958 AC006539.3-201ENST00000454258 129 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 RPL23AP31-201ENST00000456160 467 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.74□□□□□ -1.97
FOXC2Q99958 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.74□□□□□ -1.97
FOXC2Q99958 RPL21P18-201ENST00000469899 480 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.74□□□□□ -1.97
FOXC2Q99958 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.74□□□□□ -1.97
FOXC2Q99958 MLLT10P2-201ENST00000506434 249 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.74□□□□□ -1.97
FOXC2Q99958 AC010374.2-201ENST00000512933 535 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.74□□□□□ -1.97
FOXC2Q99958 MTCO3P27-201ENST00000514397 196 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 AP003355.1-201ENST00000518956 587 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.74□□□□□ -1.97
FOXC2Q99958 AC022690.1-201ENST00000526681 550 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms