Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.77□□□□□ -2.13
COL12A1Q99715 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL12A1Q99715 HMGB1P1-201ENST00000522557 636 ntBASIC1.77□□□□□ -2.13
COL12A1Q99715 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.77□□□□□ -2.13
COL12A1Q99715 MTND5P35-201ENST00000557537 1720 ntBASIC1.77□□□□□ -2.13
COL12A1Q99715 HMGB1P27-201ENST00000431429 603 ntBASIC1.77□□□□□ -2.13
COL12A1Q99715 AC011352.3-201ENST00000505162 593 ntBASIC1.77□□□□□ -2.13
COL12A1Q99715 NAMPTP2-201ENST00000505629 1115 ntBASIC1.77□□□□□ -2.13
COL12A1Q99715 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.77□□□□□ -2.13
COL12A1Q99715 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.77□□□□□ -2.13
COL12A1Q99715 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL12A1Q99715 RNA5SP76-201ENST00000516277 87 ntBASIC1.77□□□□□ -2.13
COL12A1Q99715 OR4R2P-201ENST00000530815 597 ntBASIC1.77□□□□□ -2.13
COL12A1Q99715 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.77□□□□□ -2.13
COL12A1Q99715 AC008264.2-201ENST00000610193 3731 ntBASIC1.77□□□□□ -2.13
COL12A1Q99715 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL12A1Q99715 DCAF13P1-201ENST00000495256 1330 ntBASIC1.76□□□□□ -2.13
COL12A1Q99715 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL12A1Q99715 AL356806.1-201ENST00000422524 916 ntBASIC1.76□□□□□ -2.13
COL12A1Q99715 AL591704.1-201ENST00000432574 275 ntBASIC1.76□□□□□ -2.13
COL12A1Q99715 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.76□□□□□ -2.13
COL12A1Q99715 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.76□□□□□ -2.13
COL12A1Q99715 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.76□□□□□ -2.13
COL12A1Q99715 AC025048.6-202ENST00000627667 438 ntBASIC1.76□□□□□ -2.13
COL12A1Q99715 MTND5P3-201ENST00000438536 1800 ntBASIC1.76□□□□□ -2.13
COL12A1Q99715 MIR625-201ENST00000385047 85 ntBASIC1.76□□□□□ -2.13
COL12A1Q99715 AL445685.2-201ENST00000422551 342 ntBASIC1.76□□□□□ -2.13
COL12A1Q99715 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.76□□□□□ -2.13
COL12A1Q99715 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.76□□□□□ -2.13
COL12A1Q99715 MTAPP1-201ENST00000489154 819 ntBASIC1.76□□□□□ -2.13
COL12A1Q99715 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.76□□□□□ -2.13
COL12A1Q99715 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL12A1Q99715 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
COL12A1Q99715 AC017078.1-201ENST00000416146 368 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 AL358453.1-201ENST00000422522 250 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 RPL7P37-201ENST00000425095 738 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 HSPE1P28-201ENST00000443139 211 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 RNU7-170P-201ENST00000459303 61 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 TMEM248P1-201ENST00000510579 951 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.75□□□□□ -2.13
COL12A1Q99715 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.75□□□□□ -2.13
COL12A1Q99715 RNU6-250P-201ENST00000516958 103 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 OR4H12P-201ENST00000556269 907 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 AC234775.3-201ENST00000564612 656 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.75□□□□□ -2.13
COL12A1Q99715 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.75□□□□□ -2.13
COL12A1Q99715 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.75□□□□□ -2.13
COL12A1Q99715 NCSTNP1-201ENST00000406229 144 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 VN1R31P-201ENST00000417498 730 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.75□□□□□ -2.13
COL12A1Q99715 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.75□□□□□ -2.13
COL12A1Q99715 SSXP1-201ENST00000453640 473 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 TOMM22P6-201ENST00000465035 409 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.75□□□□□ -2.13
COL12A1Q99715 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.75□□□□□ -2.13
COL12A1Q99715 MIR5002-201ENST00000584713 97 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.75□□□□□ -2.13
COL12A1Q99715 MTND4P35-201ENST00000604257 1375 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
COL12A1Q99715 AL391987.6-201ENST00000305671 199 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 MIR142-201ENST00000384835 87 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
COL12A1Q99715 AC012498.1-201ENST00000424037 437 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 AP005660.1-201ENST00000522972 293 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.75□□□□□ -2.13
COL12A1Q99715 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL12A1Q99715 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.75□□□□□ -2.13
COL12A1Q99715 CYP3A51P-201ENST00000633513 256 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 AC009501.3-201ENST00000605001 1352 ntBASIC1.75□□□□□ -2.13
COL12A1Q99715 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL12A1Q99715 RPL36AP6-201ENST00000435770 321 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 ATP5EP1-201ENST00000510257 156 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 AP001207.1-201ENST00000524051 481 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.74□□□□□ -2.13
COL12A1Q99715 AC131902.3-201ENST00000611767 581 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 MIR6132-201ENST00000622083 109 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 AL606537.1-201ENST00000607258 2011 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL12A1Q99715 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.74□□□□□ -2.13
COL12A1Q99715 MIR548J-201ENST00000408833 112 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 MTND6P18-201ENST00000439477 513 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 AL645939.1-201ENST00000453429 797 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 AP003467.2-201ENST00000520175 319 ntBASIC1.74□□□□□ -2.13
COL12A1Q99715 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.74□□□□□ -2.13
COL12A1Q99715 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
COL12A1Q99715 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
COL12A1Q99715 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL12A1Q99715 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.73□□□□□ -2.13
COL12A1Q99715 AL445669.2-201ENST00000454425 421 ntBASIC1.73□□□□□ -2.13
COL12A1Q99715 RPL9P33-201ENST00000484311 566 ntBASIC1.73□□□□□ -2.13
COL12A1Q99715 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.73□□□□□ -2.13
COL12A1Q99715 RPL21P5-201ENST00000554662 472 ntBASIC1.73□□□□□ -2.13
COL12A1Q99715 AC099654.11-201ENST00000638857 294 ntBASIC1.73□□□□□ -2.13
COL12A1Q99715 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
COL12A1Q99715 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COL12A1Q99715 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL12A1Q99715 OR5H15-201ENST00000383696 930 ntBASIC1.73□□□□□ -2.13
COL12A1Q99715 MIR598-201ENST00000384868 97 ntBASIC1.73□□□□□ -2.13
COL12A1Q99715 AC009969.1-201ENST00000438726 172 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms