Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.72□□□□□ -1.97
VAT1Q99536 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.72□□□□□ -1.97
VAT1Q99536 RNU6-416P-201ENST00000516265 103 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 SNORD59.2-201ENST00000516873 68 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.72□□□□□ -1.97
VAT1Q99536 IGJP1-201ENST00000522682 475 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 ELOCP31-201ENST00000540463 467 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VAT1Q99536 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.72□□□□□ -1.97
VAT1Q99536 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.72□□□□□ -1.97
VAT1Q99536 SETP2-201ENST00000553886 926 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.72□□□□□ -1.97
VAT1Q99536 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.72□□□□□ -1.97
VAT1Q99536 AL451007.1-201ENST00000595491 289 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AL020997.3-201ENST00000602843 359 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AL355812.1-201ENST00000603215 216 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AP004247.3-201ENST00000608682 624 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 RMST_10.1-201ENST00000616309 154 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AC068722.2-201ENST00000618734 544 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AC098679.5-201ENST00000624394 571 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AP001002.2-201ENST00000625137 386 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.72□□□□□ -1.97
VAT1Q99536 MTND2P41-201ENST00000637599 773 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VAT1Q99536 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VAT1Q99536 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VAT1Q99536 FAM35BP-202ENST00000497389 3337 ntBASIC2.71□□□□□ -1.97
VAT1Q99536 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VAT1Q99536 RNA5SP387-201ENST00000364226 106 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 Y_RNA.333-201ENST00000365274 102 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 RNU6-730P-201ENST00000383954 104 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 AL360182.1-201ENST00000397433 468 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.71□□□□□ -1.98
VAT1Q99536 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.71□□□□□ -1.98
VAT1Q99536 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.71□□□□□ -1.98
VAT1Q99536 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
VAT1Q99536 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.71□□□□□ -1.98
VAT1Q99536 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.71□□□□□ -1.98
VAT1Q99536 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.71□□□□□ -1.98
VAT1Q99536 AC105272.1-201ENST00000438604 198 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 RPL21P2-201ENST00000440049 481 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 CYCSP32-201ENST00000440548 321 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 AL929288.2-201ENST00000446368 407 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.71□□□□□ -1.98
VAT1Q99536 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.71□□□□□ -1.98
VAT1Q99536 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.71□□□□□ -1.98
VAT1Q99536 RPS27AP9-201ENST00000477681 438 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.71□□□□□ -1.98
VAT1Q99536 SNORA31.21-201ENST00000517180 77 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 RNU6-711P-201ENST00000517255 106 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.71□□□□□ -1.98
VAT1Q99536 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
VAT1Q99536 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.71□□□□□ -1.98
VAT1Q99536 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.71□□□□□ -1.98
VAT1Q99536 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.71□□□□□ -1.98
VAT1Q99536 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.71□□□□□ -1.98
VAT1Q99536 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.71□□□□□ -1.98
VAT1Q99536 AC106734.1-201ENST00000568646 663 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 AC074051.3-201ENST00000570238 358 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.71□□□□□ -1.98
VAT1Q99536 AC138761.3-201ENST00000579993 334 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 SNORD84-203ENST00000584275 78 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 BDH2P1-201ENST00000602288 736 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 AC135507.2-201ENST00000612443 309 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 AC073968.1-201ENST00000618594 637 ntBASIC2.71□□□□□ -1.98
VAT1Q99536 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.71□□□□□ -1.98
VAT1Q99536 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VAT1Q99536 MIR128-1-201ENST00000384921 82 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 SNORA48.2-201ENST00000390926 124 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 RNU6-1077P-201ENST00000410506 102 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AC233981.1-201ENST00000423224 461 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 VN1R42P-201ENST00000424651 344 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AC233728.2-201ENST00000425348 757 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 SAR1AP4-201ENST00000429225 591 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.7□□□□□ -1.98
VAT1Q99536 RNFT1P2-201ENST00000443064 757 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 RPL39P40-201ENST00000445481 146 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AC005002.1-201ENST00000447458 540 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 RPS3AP14-201ENST00000483907 780 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 MTND3P24-201ENST00000506306 329 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 MTCYBP37-201ENST00000510642 1133 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 RNA5SP282-201ENST00000516355 108 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 RNU6-56P-201ENST00000516986 93 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AC104986.1-201ENST00000517978 436 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.7□□□□□ -1.98
VAT1Q99536 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.7□□□□□ -1.98
VAT1Q99536 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
VAT1Q99536 AC079600.2-201ENST00000550076 130 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 COX6CP3-201ENST00000580869 223 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.7□□□□□ -1.98
VAT1Q99536 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.7□□□□□ -1.98
VAT1Q99536 AC040174.2-201ENST00000602701 465 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.7□□□□□ -1.98
VAT1Q99536 AL161756.2-201ENST00000604597 246 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 BX664608.1-201ENST00000610519 487 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AC131902.3-201ENST00000611767 581 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AL359198.2-201ENST00000611836 194 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms