Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 SNORA64.1-201ENST00000362600 132 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 Y_RNA.54-201ENST00000362766 105 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 Y_RNA.105-201ENST00000363182 111 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 RNA5SP507-201ENST00000363603 121 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 Y_RNA.439-201ENST00000384119 94 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 MIR301A-201ENST00000385261 86 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 MIR1286-201ENST00000408112 78 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 CYCSP33-201ENST00000414485 327 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 RPL23AP27-201ENST00000415161 451 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 AL096701.2-201ENST00000416920 238 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 MRPS21P3-201ENST00000436696 262 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 CYCSP51-201ENST00000443545 318 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 AP004607.2-201ENST00000533949 322 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 MIR548AI-201ENST00000579940 88 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 AC004852.3-201ENST00000614131 326 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 AC073869.8-201ENST00000641806 335 ntBASIC6.28□□□□□ -1.4
PHOX2BQ99453 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PHOX2BQ99453 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PHOX2BQ99453 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
PHOX2BQ99453 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.27□□□□□ -1.41
PHOX2BQ99453 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PHOX2BQ99453 Y_RNA.291-201ENST00000364886 113 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PHOX2BQ99453 SNORD115-46-201ENST00000390982 71 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 RPL21P67-201ENST00000402896 478 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 U3.42-201ENST00000408746 214 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 RNU6-130P-201ENST00000411112 103 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.27□□□□□ -1.41
PHOX2BQ99453 RPS26P47-201ENST00000427219 348 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.27□□□□□ -1.41
PHOX2BQ99453 PIGFP3-201ENST00000441918 722 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 Y_RNA.644-201ENST00000459006 113 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC087190.1-201ENST00000484462 480 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC107032.1-201ENST00000485945 480 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 RN7SL30P-201ENST00000488416 306 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC007686.1-201ENST00000488511 463 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC074250.1-201ENST00000511117 192 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC6.27□□□□□ -1.41
PHOX2BQ99453 Y_RNA.674-201ENST00000516362 113 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 SNORA25.14-201ENST00000516481 132 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AP000648.1-201ENST00000529682 397 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC093023.1-201ENST00000547375 507 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 RN7SL708P-201ENST00000580952 299 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 MIR4436B2-201ENST00000581415 91 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 MIR4436B1-201ENST00000583272 91 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 AC034102.8-201ENST00000615146 484 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.27□□□□□ -1.41
PHOX2BQ99453 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
PHOX2BQ99453 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
PHOX2BQ99453 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PHOX2BQ99453 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.26□□□□□ -1.41
PHOX2BQ99453 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.26□□□□□ -1.41
PHOX2BQ99453 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PHOX2BQ99453 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.26□□□□□ -1.41
PHOX2BQ99453 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PHOX2BQ99453 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
PHOX2BQ99453 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PHOX2BQ99453 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.26□□□□□ -1.41
PHOX2BQ99453 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PHOX2BQ99453 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PHOX2BQ99453 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PHOX2BQ99453 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.26□□□□□ -1.41
PHOX2BQ99453 MIR375-201ENST00000362103 64 ntBASIC6.26□□□□□ -1.41
PHOX2BQ99453 Y_RNA.83-201ENST00000363005 113 ntBASIC6.26□□□□□ -1.41
PHOX2BQ99453 RNU6-1179P-201ENST00000384667 107 ntBASIC6.26□□□□□ -1.41
PHOX2BQ99453 MTCO3P29-201ENST00000432119 779 ntBASIC6.26□□□□□ -1.41
PHOX2BQ99453 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.26□□□□□ -1.41
PHOX2BQ99453 RPL26P6-201ENST00000440913 438 ntBASIC6.26□□□□□ -1.41
PHOX2BQ99453 AC090804.1-201ENST00000448870 490 ntBASIC6.26□□□□□ -1.41
PHOX2BQ99453 RPL23AP2-201ENST00000471227 466 ntBASIC6.26□□□□□ -1.41
PHOX2BQ99453 AC006463.2-201ENST00000473326 348 ntBASIC6.26□□□□□ -1.41
PHOX2BQ99453 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms